Gene PHATRDRAFT_17860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_17860 
Symbol 
ID7196905 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp2146067 
End bp2147034 
Gene Length968 bp 
Protein Length253 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176919 
Protein GI219110335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.587324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCGATGGCC TAACAGTCAC ATTCAAGACT GTTGGATCAA TCGCATCGAT AAGCCATGAA 
GATTCTTGTC GGAATCAAAC GCGTTGTTGA CTACGCGGTC AAGGTGCGGG TCAGCAAAGG
AACCGTGGAT TTGGCCAATG TAAAGCAATC TATGAATCCT TTTTGTGAGG TACGTGCGTC
TGCAGTTTCA ATACAGACTT CGCCAGGACC TCCGGGAGAG CTTGGACTTT GGTGTTATGG
TCATTATGCT CTGACAACTT CAGGAGTAGA TCTGACATTC TATTCCTTTA GATTGCAGTA
GAGGAGGCCG TTCGCTTGAA AGAATCCAAG AACGCATCGG AAGTCGTCGC ACTCAGCATC
GGCCCAAAGC AGTGCACCGA AACAATTCGT ACGGCGCTCG CCATGGGATG TGACCGTGGA
ATTCACATTC AAACAGACTT ACGTACCGAC TATATGGATT TGCAGCCTTT TGCGATCGCA
CAGCTGTTCC AAAAGATCGT TGAAAAGGAA AAATCAGATC TGGTTCTGTT GGGCAAACAG
GGCATCGATT CGGATTGTGG CCAAACGGGG CCAATGCTCG CGGGAATGAT GGGGTGGCCA
CAGGTGACGT TTGCAGCCAA GGTGGAAGTC AAAGACGGGG GGCTTTTGGT GGAACGCGAG
ACGGATTCTG GTACAGAAAC GATTCAGGTC AAATCTCTTC CTGCCGTTGT AACTTGCGAC
CTCCGCCTCA ACGAGCCTCG TTACGCTACG CTTCCCAACA TTATGAAAGC CAAGAAAAAG
CCTGTCGAAA CGTTGAAAGC GGAAGAAATG GGAGTTGATC TGGTACCGCA TAATCAAGTA
TTGGAGATTC TAGAGCCGCC GCCAAGAAAA GAAGGAATTA TGGTGGAGAA TGTAGATTCG
TTGATCGACA AGCTTCGCAA TGAAGCTCAA GTTATCTAGC TGTAAGCAAA TTCATTCCAG
TTTGACAG
 
Protein sequence
MKILVGIKRV VDYAVKVRVS KGTVDLANVK QSMNPFCEIA VEEAVRLKES KNASEVVALS 
IGPKQCTETI RTALAMGCDR GIHIQTDLRT DYMDLQPFAI AQLFQKIVEK EKSDLVLLGK
QGIDSDCGQT GPMLAGMMGW PQVTFAAKVE VKDGGLLVER ETDSGTETIQ VKSLPAVVTC
DLRLNEPRYA TLPNIMKAKK KPVETLKAEE MGVDLVPHNQ VLEILEPPPR KEGIMVENVD
SLIDKLRNEA QVI