Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17860 |
Symbol | |
ID | 7196905 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 2146067 |
End bp | 2147034 |
Gene Length | 968 bp |
Protein Length | 253 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176919 |
Protein GI | 219110335 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.587324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCGATGGCC TAACAGTCAC ATTCAAGACT GTTGGATCAA TCGCATCGAT AAGCCATGAA GATTCTTGTC GGAATCAAAC GCGTTGTTGA CTACGCGGTC AAGGTGCGGG TCAGCAAAGG AACCGTGGAT TTGGCCAATG TAAAGCAATC TATGAATCCT TTTTGTGAGG TACGTGCGTC TGCAGTTTCA ATACAGACTT CGCCAGGACC TCCGGGAGAG CTTGGACTTT GGTGTTATGG TCATTATGCT CTGACAACTT CAGGAGTAGA TCTGACATTC TATTCCTTTA GATTGCAGTA GAGGAGGCCG TTCGCTTGAA AGAATCCAAG AACGCATCGG AAGTCGTCGC ACTCAGCATC GGCCCAAAGC AGTGCACCGA AACAATTCGT ACGGCGCTCG CCATGGGATG TGACCGTGGA ATTCACATTC AAACAGACTT ACGTACCGAC TATATGGATT TGCAGCCTTT TGCGATCGCA CAGCTGTTCC AAAAGATCGT TGAAAAGGAA AAATCAGATC TGGTTCTGTT GGGCAAACAG GGCATCGATT CGGATTGTGG CCAAACGGGG CCAATGCTCG CGGGAATGAT GGGGTGGCCA CAGGTGACGT TTGCAGCCAA GGTGGAAGTC AAAGACGGGG GGCTTTTGGT GGAACGCGAG ACGGATTCTG GTACAGAAAC GATTCAGGTC AAATCTCTTC CTGCCGTTGT AACTTGCGAC CTCCGCCTCA ACGAGCCTCG TTACGCTACG CTTCCCAACA TTATGAAAGC CAAGAAAAAG CCTGTCGAAA CGTTGAAAGC GGAAGAAATG GGAGTTGATC TGGTACCGCA TAATCAAGTA TTGGAGATTC TAGAGCCGCC GCCAAGAAAA GAAGGAATTA TGGTGGAGAA TGTAGATTCG TTGATCGACA AGCTTCGCAA TGAAGCTCAA GTTATCTAGC TGTAAGCAAA TTCATTCCAG TTTGACAG
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Protein sequence | MKILVGIKRV VDYAVKVRVS KGTVDLANVK QSMNPFCEIA VEEAVRLKES KNASEVVALS IGPKQCTETI RTALAMGCDR GIHIQTDLRT DYMDLQPFAI AQLFQKIVEK EKSDLVLLGK QGIDSDCGQT GPMLAGMMGW PQVTFAAKVE VKDGGLLVER ETDSGTETIQ VKSLPAVVTC DLRLNEPRYA TLPNIMKAKK KPVETLKAEE MGVDLVPHNQ VLEILEPPPR KEGIMVENVD SLIDKLRNEA QVI
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