Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17504 |
Symbol | |
ID | 7196398 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 1072209 |
End bp | 1074605 |
Gene Length | 2397 bp |
Protein Length | 673 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177215 |
Protein GI | 219110927 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAAAGGACGA CAACCGAAAA AAGACCTTCG TCTCTCTGAC TTGTTGCACG ACAGTTCACT ATTCTCTGAC ACTTCCGAAG TGAAACTGTA AAACGTTCGT GGACGAGTCA CTCTCTTAAA GTCTTTGACT CTCTTACCCA TTTGATATTA ATTCTTGCAG CTCCTTAGCT TCATATTTCT CTCTCTCATC GAAACACTGG AATCATGAAA TTTGCTGTTG GTACCGTATT CGCCCTCCTC GTGGCTGACA AGACGCTTGC CTTTACACCA AACGCCTTGC CGTCCCGGAC ATCGCGCCGA ACGAACAACT CGGCTCGATA CATGGCCGTA GACGCTCCTC CGCCGGCGAG CAATAACGAT TTGCCCGTCA TTCAGCAGAA TTCCTACGGC CAGCCCACCG ACGTGCGTTA TTCAGACTTT TTGAGACTCG TCAACGCGGA TCGTGTGGAG AAGGTCACCT TCAGTGCTGA CGGTACGCAG TTGTTGGGAG TCGATGTAGA CGGCGCTCGT GTCAAGATTG AAGCACTCCC CAATGATCCG GATCTGCTCA CGTCTCTCAC CACACACAAG GTACGTTACG TTTATTCGTG CGGACGGCTT TCCAGCGAAC CCCATCAATA TCGATACACC ACCGTCTCAC CAACTTTTAT GGTAATTTCA ATCCCGCGCA GGTTGATGTC ACCGTTCTTC CCGCTCAAGA AGCCAGTGGT CTCGGTGAAC TCGCCCAGAG TCTCATTTTC CCCGCCGCGC TCTTTGCCGG TCTCTTTTTC CTTTCCCGCC GCGCTGGTGG CGGTATGGGA GGCGGCATGG GCGGGCCCGG AAACCCCATG GGGTTCGGCA AGAGCAAAGC CCAAGTACAA ATGGTCCCCG ATACCGGGGT TACCTTTGAC GATGTGGCCG GCTGCGACGG CGCCAAGCTC GAACTCGCCG AAGTCGTAGA TTTCCTCAAG CAACCCGAAG CCTACACCAA GAATGGGTGC AAGATCCCAC GCGGTGTCAT CCTGGACGGA CCTCCCGGTA CCGGAAAGAC CCTTCTCGCC AAGGCTGTGG CCGGTGAAGC TGGTGTTCCC TTCATCAGTA TTTCGGGTTC TGAGTTTGTC GAAATGTTTG TCGGTGTGGG AGCGTCTCGC GTCCGCGACA TTTTCAGTCA GGCCAAAAAG AACGCCCCCT GCATTATCTT TATTGACGAG ATTGATGCCG TCGGTCGCCA ACGTGGTGCC GGTTTTGCCG GAGGTAACGA CGAGCGCGAA CAGACGGTCA ATCAGATCCT CGTTGAAATG GACGGTTTCG ATGGCAACCC GGGTGTCATT ACCATTGCCG CAACCAATCG CGTCGACATT CTTGATTCCG CCCTGCTGCG CCCGGGCCGT TTTGATCGTA AGGTCACCGT TGATCTTCCC GATTTCAAGG GCCGCACCCG TATTTTGGGT GTTCATTCTC GTGGCAAGCC TCTCGAACCC GATGTCGACC TCGAAGCCAT CTCCCGCCGT ACCCCTGGTT TCTCCGGTGC CCAGTTAGAG AATCTCATGA ACGAAGCTGC AATTTCTGCT GCGCGTGCGG AAAAGTCCAC CATTGGCTGG GAACAGATCG ATGGTGCCGT CGACCGTATT ATGGTTGGTT TGGAAAAGAA GGGTGGCAAC CCCCAGCTCA AGCAGAAAGA ACTTGTGGCT TACCACGAAG CCGGACACGC CATTGTGGGT GCCCTCGTAC CCGACTACGA TCAAGTCCAG AAGATAACCA TCATTCCCCG CTCCAATGGC GCTGGTGGTT TGACTTTCTT CGCTCCTCAA GAATCTCGCC TCGAATCCGG CATGTACAGC AAACAGTATT TGGAGTCGCA GTTGGCCGTT GCTCTCGGTG GACGTCTGGC GGAAGAAATC ATCTATGGTG AAGACATGGT TACCACCGGT GCCTCCAACG ATATCCAGCA GGTAGCCAAC ATTGCCAAGC GCATGGTCAA GGAATGGGGA ATGAGCGACA AGGTGGGCCG CGTTGCGCTT TCGGAACCCC AAGGTGCCGG TCCGTTTATG GGAATGCAAA TGATGCGTCG CTCAACCCAG TGGGGCAACC GCATCATGGG AACTGTCGAA GAAGAAGTCG AACGCCTCGT CAACAACTCA TACTTGGTGG CCAAGCAAAT TCTGAGCGAA AACCGGGATT TGCTGGAGCA CTTGGCGCAG ACTTTGATGG ACCAAGAAGT CGTGTCTGCC GAAGAATTCG AAATGATGCT GGTACAATTC AAGGCCAAGA CTATTGATTA CAAGATCATC GGAGAGGAAA AGAACCGCGA ACAGCTGCCC TTCCAGGGCA TGCCAGCACG CGTGTAAAAA CTATTGGTGA TTGGTTCCAT TTCCTATAAA AACATTTACA AGACTACTAG CTACATGTAC CTGCTTC
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Protein sequence | MKFAVGTVFA LLVADKTLAF TPNALPSRTS RRTNNSARYM AVDAPPPASN NDLPVIQQNS YGQPTDVRYS DFLRLVNADR VEKVTFSADG TQLLGVDVDG ARVKIEALPN DPDLLTSLTT HKVDVTVLPA QEASGLGELA QSLIFPAALF AGLFFLSRRA GGGMGGGMGG PGNPMGFGKS KAQVQMVPDT GVTFDDVAGC DGAKLELAEV VDFLKQPEAY TKNGCKIPRG VILDGPPGTG KTLLAKAVAG EAGVPFISIS GSEFVEMFVG VGASRVRDIF SQAKKNAPCI IFIDEIDAVG RQRGAGFAGG NDEREQTVNQ ILVEMDGFDG NPGVITIAAT NRVDILDSAL LRPGRFDRKV TVDLPDFKGR TRILGVHSRG KPLEPDVDLE AISRRTPGFS GAQLENLMNE AAISAARAEK STIGWEQIDG AVDRIMVGLE KKGGNPQLKQ KELVAYHEAG HAIVGALVPD YDQVQKITII PRSNGAGGLT FFAPQESRLE SGMYSKQYLE SQLAVALGGR LAEEIIYGED MVTTGASNDI QQVANIAKRM VKEWGMSDKV GRVALSEPQG AGPFMGMQMM RRSTQWGNRI MGTVEEEVER LVNNSYLVAK QILSENRDLL EHLAQTLMDQ EVVSAEEFEM MLVQFKAKTI DYKIIGEEKN REQLPFQGMP ARV
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