| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1485 |
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| Symbol | |
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| ID | 7091828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 1601983 |
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| End bp | 1603191 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643464817 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_002361803 |
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| Protein GI | 217977656 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 95 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAG CCGACGACGA CGGGGAGGCT GCGCCGCGGC CACGCCATGC CGAACCGGAC
CTGCGGCTGC GCGCCGAGCC GCCGCGCGTC ACCCGCCTGT CGCGCAAAGT CCTGATCGGG
CTGGGAGCAA TCGCCGCCTT CGGCGTCGCG GGAGCGCTGT TCTATGCGCT CCAGAGCCGA
CGCGGCGACA ACGCGGGCAA GGAACTCTAT TCGACCGAGA ACCGCGCGAC GCCAGACGGC
CTCGCCAATC TGTCGAAAGA CTACACCGGC GTTCCAAAAC TCGGTCCGCC CTTGCCCGGC
GATCTCGGCC GGCCGATCCT CAATTCGCAG AACCAGACGG TTCCGGCAAT CGGCGCAACG
GGAGGCGACG CCGCGGAGCA GCATCGCTTA CAGGAAATCG AGGCGGCGCG GGTCAGCCGT
CTCTTCGCGC CAACGGAGCG GCAGCCGGGC AGCGCCGCGC CGGCGCCGGC GGCAGCCGTC
GCCACGTCGG GCGCGCTGCT CGCCGTCCCG GCTGAAGCGC CGCCGATCGA TCCCAACGCC
GTTCAAAACA TGCAGGACCG CAAGGTCGCC TTCGTCAGTG CTCCCGCCGA CCGACGGACC
GTCAGTTCGG ATCGGCTCGC CGATCCGCTT TCGCGCTCTA TCGTGCAGGC GGGCACCGTC
ATCCCGGCCG CGCTCATTAC GGGCATCCGC TCCGATCTGT CGGGCGCGAT CACCGCCCAG
GTGACGGAAG CGGTGTATGA CACGCCGACC GGCAAATATC TCCTGATCCC GCAAGGCGCG
CGGCTGATCG GCCAATATGA CAGCGATGTC GCTTTCGGCC AAAGCCGCGT CCTGCTGGTC
TGGACCCGCC TCATCATGCC GAACGGCCAA TCGATCGTGT TGGAGCGGCA GGAGGGCGCG
GACGCGCAGG GCTACGCCGG CCTTGAGGAC GAGGTCGACA ACCACTGGTG GGATCTCGCC
AAGGCCGCCA TGCTTTCGAC CTTGCTCGGC GTCGGAACGG ACCTTGGTGC CAGCGGCAGC
AACGACAGCG ATCTCATCCG CGCGCTGCGC CAGGGCTCGC AGGATTCGAT CAGCAATACG
GGAGAGCAGA TCGTGCGTCG CCAGCTCAAC ATCCAGCCGA CGCTGACCAT CCGGCCGGGA
TTTCCGGTGC GCGTCATCGT CAACCGCGAC CTGGTGCTGG CGCCTTACGC AGAGGAGGCA
AGTCGATGA
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| Protein sequence | MTEADDDGEA APRPRHAEPD LRLRAEPPRV TRLSRKVLIG LGAIAAFGVA GALFYALQSR
RGDNAGKELY STENRATPDG LANLSKDYTG VPKLGPPLPG DLGRPILNSQ NQTVPAIGAT
GGDAAEQHRL QEIEAARVSR LFAPTERQPG SAAPAPAAAV ATSGALLAVP AEAPPIDPNA
VQNMQDRKVA FVSAPADRRT VSSDRLADPL SRSIVQAGTV IPAALITGIR SDLSGAITAQ
VTEAVYDTPT GKYLLIPQGA RLIGQYDSDV AFGQSRVLLV WTRLIMPNGQ SIVLERQEGA
DAQGYAGLED EVDNHWWDLA KAAMLSTLLG VGTDLGASGS NDSDLIRALR QGSQDSISNT
GEQIVRRQLN IQPTLTIRPG FPVRVIVNRD LVLAPYAEEA SR
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