Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1261 |
Symbol | |
ID | 7091270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 1355481 |
End bp | 1356938 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643464602 |
Product | Peptidoglycan-binding domain 1 protein |
Protein accession | YP_002361592 |
Protein GI | 217977445 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGGAC TCGCGGCGGT TGCGCTTCTG ATGATCTGGA GCCTGCCGGT CGCTGCGGGG CCGCCAACGC CGGGCTACGT CGAGGCGGCG CGCGCCTTCA GTCAGCTGCC GATCAGCGAA AGGCTCAAAT TCAAAGTCCT GCTGACGGCG GCAGGATATT GGCCGGTGAC CGCGGACGCC AATTTCAGCC GCCAGCTTTT TGAAGCGACG GCGCAGTATC AAAGCGACAA CGGGCTTTCG GCGACCGGCG CCATAGACGA AGATCTACGC GCGCGGCTTT TTCGCGCTGG CGCGCCGCTG TTCGAGATGT GGGGATTTCG GGCGATCCCG CATCCATCGC GCGGTTACAA GATCTGGGCG CCGATGGGGC TTGGCCTGGT GGCCGAGCGG GACAAGGATG GCCTCACCTG GCGAGATCCG GCCAAGCGGG TTTGGCTGAC CTATGACTAC CTCCGCGACG TCAATCTCGC CAACGCCTAT AAATCGGTGG TCGAGAAAGT CATTGCCGAC GGCGGGCAGA TCTCTTTCAA GATTTTGACG GATGACTTCT TCATCGTGTC GTCGCGCGCC AATGGGCTCG ACAGTTACAT TCGCTGCCAA AGCGATCGCC CGGGCGTGAT TTGGCTCTCG CTGTTTTGGC TGGAGTCCGC CGCCGATCTG CATCTGGAGC GCGCGGCAGC TTTAATATCT GGGTCGCTCG CAAGTTCGAT GAGCGGCGCG CCATTCGCCG ATCTCTCTCA GCTGCCCTCG TCGGTCGGCT TGGCGCCGGC GGCGGACCCC GCCGGCGTCA GGCCAACGGC TGCGTTGGCG CCAGAGACGG CGCAAAAGCA GCGCGAGAAC ATGCCCGGAA TGGGCTTCTC TGTGAACGAC GAGGGATTTG TTGTAACCAG CGCCCAAATC GTCGCGTCCT GCTCGAACAT CGCGGTCGCG CAGAATGGAC GCGCCGCGGT CCAAGCCGAA CTTGTCGCTC GCGACGACGC CGCGGATCTT GCCCTTCTCA AAACGCCGTT GAAGCCGGAC GGTGTCGCCA ATATTCGCTC CGACGTCCAG CTCGGCGAAA CGATCGAGGC GTTTGCCTTT CCGCTCCCTC CCGCGCCGCT GAACGCGGGC GAGTTTTCTT TCGGCCGCAT CACGGGCCTC ACTGGCGTTG CGGGCGACGA CCGCTTCCTG CAGATTTCGA CGCCGGTCCA GCCGGCCGAT TCTGGAAGCC CGCTTTTCGA CCAGAGCGGC TATGTTGTCG GAGTCGTTTC GGCGAGGCTC GACGCCTTCA AGACCCTTGT AGCGACGAGC GGCGATGCGC CGCAAAAGGT GAACGTCGCG CTTAAAGGAA ATCTCCTCGC GGGCTTTCTT GAGGGCAACC ATATCGCTTT CACGGGCGCG ACCGCGTCGA AGGAGATGTC GGCGCCGGCG CTGACGGCTC AGGCTCGAGC CGTGAGCGTT TCCGTCTCAT GCCGATAG
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Protein sequence | MKGLAAVALL MIWSLPVAAG PPTPGYVEAA RAFSQLPISE RLKFKVLLTA AGYWPVTADA NFSRQLFEAT AQYQSDNGLS ATGAIDEDLR ARLFRAGAPL FEMWGFRAIP HPSRGYKIWA PMGLGLVAER DKDGLTWRDP AKRVWLTYDY LRDVNLANAY KSVVEKVIAD GGQISFKILT DDFFIVSSRA NGLDSYIRCQ SDRPGVIWLS LFWLESAADL HLERAAALIS GSLASSMSGA PFADLSQLPS SVGLAPAADP AGVRPTAALA PETAQKQREN MPGMGFSVND EGFVVTSAQI VASCSNIAVA QNGRAAVQAE LVARDDAADL ALLKTPLKPD GVANIRSDVQ LGETIEAFAF PLPPAPLNAG EFSFGRITGL TGVAGDDRFL QISTPVQPAD SGSPLFDQSG YVVGVVSARL DAFKTLVATS GDAPQKVNVA LKGNLLAGFL EGNHIAFTGA TASKEMSAPA LTAQARAVSV SVSCR
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