| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1966 |
|---|
| Symbol | |
|---|
| ID | 7084434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 2216514 |
|---|
| End bp | 2217494 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643698991 |
|---|
| Product | Transketolase central region |
|---|
| Protein accession | YP_002355613 |
|---|
| Protein GI | 217970379 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.390541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGA TCAATCTCGT CGAGGCGGTC AACCTGGCCC TCGCCCACGA GCTCGCGCGC
GACGAGGCGG TCGTGCTGCT CGGCGAGGAC ATCGGCGCCA ACGGCGGCGT GTTCCGCGCC
ACGGTCGGGC TGCAGCAGCG CTTCGGCGCC GGGCGCGTGG TCGACACCCC GCTCGCCGAG
ACCGCGATCG TCGGCACCGC GATCGGCATG GCGGCGATGG GCCTCAGGCC GGTGGCGGAG
ATCCAGTTCT CCGGCTTCCT GTATCCGGCG ATCGACCACC TGATCAACCA TGCCGCGCGC
CTGCGCAACC GCACCCGCGG CCGGCTCACC TGCCCGCTGG TCGTGCGCAC CCCCTGCGGC
GGCGGCATCC ATGCGCCCGA GCACCACTCC GAGAGCCCGG AGGCGATGCT CGCCCACACC
CCCGGCCTGC GCGTGGTCAT GCCGTCCTCG CCCGCACGCG CCTACGGCCT GCTGCTGGCG
GCGATCCGCG ACCCCGACCC GGTGATGTTC CTCGAGCCGA CGCGGATGTA CCGCCTGTTC
CGCCAGGAGG TGGCCGACGA CGGCGAGGCG CTGCCGCTGG ACGTGTGCTT CACCCTGCGC
GGCGGCACCG ACCTCACCCT GGTGAGCTGG GGCGCGATGC TGCACGAGAC CCAGGCCGCG
GCCGACGCGC TCGCCACCGA GGGCATCTCG GCCGAGGTCA TCGACGTCGC CACGCTCAAG
CCGCTCGACC TGCCGACCAT CCTGGAGTCG GTCGCCCGCA CCGGGCGTTG CGTGATCGTG
CACGAGGCCG CGCGCACCGC CGGCCTGGGC GCCGAGATCG CGGCCGGCCT CGCCGAAGAG
GGCCTGTATT CCCTGCTCGC GCCGGTGCAG CGCGTCACCG GCTACGACAC GGTGATGCCG
CTGTCGCGGC TCGAAACCCA GTACCTGCCG AGCGTCGAAC GCATCGTCGC GGCGGCGCGC
AAGACCCTGG AGGCATCATG A
|
|---|
| Protein sequence | MAEINLVEAV NLALAHELAR DEAVVLLGED IGANGGVFRA TVGLQQRFGA GRVVDTPLAE
TAIVGTAIGM AAMGLRPVAE IQFSGFLYPA IDHLINHAAR LRNRTRGRLT CPLVVRTPCG
GGIHAPEHHS ESPEAMLAHT PGLRVVMPSS PARAYGLLLA AIRDPDPVMF LEPTRMYRLF
RQEVADDGEA LPLDVCFTLR GGTDLTLVSW GAMLHETQAA ADALATEGIS AEVIDVATLK
PLDLPTILES VARTGRCVIV HEAARTAGLG AEIAAGLAEE GLYSLLAPVQ RVTGYDTVMP
LSRLETQYLP SVERIVAAAR KTLEAS
|
|---|
| |