| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1392 |
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| Symbol | |
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| ID | 7084513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1549646 |
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| End bp | 1550893 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643698409 |
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| Product | pyridoxal-dependent decarboxylase, exosortase system type 1 associated |
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| Protein accession | YP_002355047 |
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| Protein GI | 217969813 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase
[TIGR03099] pyridoxal-dependent decarboxylase, exosortase system type 1 associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0214918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCC CCGCCCGCAG CCTGCCCACG CACGCGCCGC AGACCGTGTT CGCGATCGCC
GACGGCGAAC TCCAGATCGC TGGCCAGCCA CTCTCCCGGC TCGCCGCGCG TGTCGGGCGG
ACGCCCTTCT ACGCCTACGA TCGCGGCGCG ATCGCACGCC GGGTGGCCGA GCTGCGCGCG
GCACTGCCGC CCGCCATCGA GCTGCACTAC GCGATGAAGG CCAACCCGAT GCCGGCGCTG
GTGGGCCACC TGGCGCGCCT GGTCGACGGC ATCGACGTCG CCTCCGCCGG CGAGCTGCAG
GTCGCGCTCG ACGCCGGCGC CGACCCCCAG CACGTCAGCT TCGCCGGTCC CGGCAAGCGC
GACACCGAGC TGCGCCAGGC GGTGGCCGCC GGCATCCTGG TCAATGTGGA ATCCTTCCGC
GAGATCGCGC CGCTGGCCGA GGCCGCGGCC GCGCTCGGCG TGCCGGCGCG GGTCGCAGTA
CGGGTGAATC CGGACTTCGA GCTCAAGTCC TCGGGCATGA AGATGGGCGG CGGCCCCAAG
CCCTTCGGCG TGGACGCCGA GCAGGTACCC GGCTTGCTCG CCGAGATCAG CCGCGCCGGG
CTCGCCTTCG AGGGCTTCCA CCTCTTCGCC GGCTCGCAGA ACCTCAAGGC CGAGGCCATC
GTCGAGGCCC AGCGCAAGAG CTTCGAACTC GCCCTGCGCC TGGCCGCGCA CGCCCCCGCC
CCGGTGCGCA CGCTGAACCT CGGCGGCGGC TTCGGCATCC CGTACTTCCC CGGCGAACAG
GCGCTCGACC TGACGCCGAT CGCCGCCGGC CTCGCCGACA TCGTCGCCGA GGCCGCACAA
GCCCTGCCCG AGGCCAGGAT CGTGCTGGAA CTCGGCCGCT ACCTGGTCGG CGAGGCCGGC
GTGTATGTGT GCCGGATCAC CGACATCAAG GTCTCGCGCG GCCACACCTA TCTCGTCACC
GACGGCGGCC TGCACCACCA CTTGTCGGCG AGCGGCAACT TCGGCCAGGT GATCCGCAAG
AACTACCCGG TTGCGATCGG CAATCGCATG GACGCTCCAC CTGCCGGCGA GCCGGCATCG
GTGGTCGGCC CACTCTGCAC TCCGCTCGAC GTGATCGCCG ATCGAATGCC GCTACCGGCC
GCGCAGATCG GCGACCTCAT CGTGGTGTTC CAGTCCGGCG CCTATGGCGC GAGCGCGAGC
CCGCAGGCCT TCCTCGGCCA CCCGCAAGTG GTCGAGATCC TCGCCTGA
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| Protein sequence | MNAPARSLPT HAPQTVFAIA DGELQIAGQP LSRLAARVGR TPFYAYDRGA IARRVAELRA
ALPPAIELHY AMKANPMPAL VGHLARLVDG IDVASAGELQ VALDAGADPQ HVSFAGPGKR
DTELRQAVAA GILVNVESFR EIAPLAEAAA ALGVPARVAV RVNPDFELKS SGMKMGGGPK
PFGVDAEQVP GLLAEISRAG LAFEGFHLFA GSQNLKAEAI VEAQRKSFEL ALRLAAHAPA
PVRTLNLGGG FGIPYFPGEQ ALDLTPIAAG LADIVAEAAQ ALPEARIVLE LGRYLVGEAG
VYVCRITDIK VSRGHTYLVT DGGLHHHLSA SGNFGQVIRK NYPVAIGNRM DAPPAGEPAS
VVGPLCTPLD VIADRMPLPA AQIGDLIVVF QSGAYGASAS PQAFLGHPQV VEILA
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