Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | UUR10_0178 |
Symbol | rpoB |
ID | 6983781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ureaplasma urealyticum serovar 10 str. ATCC 33699 |
Kingdom | Bacteria |
Replicon accession | NC_011374 |
Strand | + |
Start bp | 209295 |
End bp | 213599 |
Gene Length | 4305 bp |
Protein Length | 1434 aa |
Translation table | 4 |
GC content | 30% |
IMG OID | 643399753 |
Product | DNA-directed RNA polymerase subunit beta |
Protein accession | YP_002284583 |
Protein GI | 209554116 |
COG category | [K] Transcription |
COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATA ATAAAAATTA TACTGAGAAA TTTATTACTG ATAAAGTAAC GCGAAGAGAT TACTCAAAAA TTAAATCTAA TTTTGAAGGA CCAAACTTAC TTGAAATCCA AGTCGAATCT TTTAAACGTT TTATGGAAAA AGATTTAAAG GAAGTAATTT CTGGTATTTT TCCATTAAAA TCTCCTCAAG GTAAGTATAC ACTAGCATTT AAAGGTTTAA AAATTAAACA ACCAACAAAA GATGAAAGTG CTTGTCGTGA TGAAGGTAAA ACATTTGAAA CACCAATTTA TATCGATTTA GAATTAACAG ATAATTATAC TGGTGAAGTA AAACGTGCAC AACGAAATGC TAAAACTGGT GAAGATGGTA TTTATTTAGG GGCAATTCCT AAAATGACAG AAAAGGGAAC TTTTGTTATT AATGGAATTG AAAAGTTTGT TATCTCACAA ATTGTTAGAT CGCCAGGGAT TTATGTACTT GGTAAATCAA GTATTAAATT AAATGGTTCA CGTAAACGTT TGTTTGAAGG TAAAATTTGT GAAATTTACC CTTCAAAAGG AACTTTAATG CTTGGATATA TTCCAAAAGA TCGTCATAAC ATTCAAATTG TTGCCCGTGA TTCATCAGGG GACAATGCGC AAACTTTTTC AATAACTACT TTATTAAAAG CTTTTGGTTT AACAAGTGCT GAAATTTTAA AAATCTTTAA TAACGAAAAA GAAATTCGTG AGTCATTAGA AGTTGAAAAA TACTCTCCAG AATATATTTT TGAAAATTCA CAAGAAAATG AAATTATTTT TAAAATTTAT AGTGATGCAC ACGATATTCA TGAAAAAGCT GATCGTCGTG AATCAAATAA CAAATTAAGA GAAGAATATA TTGAACAAGG TTCACCACTT TTATCAAAAT TAAAAGAATT AATTTTTGAT TATGTTGAAA AAAGTGATGA AATTGATGCT TTATTACACG AAAATAAAGA TGTTGAAGAC GCTAATTTCA TTAAAAATAA CAAAAAATTA TATGATGAAC GAGAAGAAAT CATTAATTGC ATTATTAGTG AAAAAGCAGC TAAAGACATT GTTGAATTAT TAGGTATTAA TATTAAAAAT GTTGAAACAC TAAGACATTT AGGTAAAGCT TCATATCAAC TTGCTTTACA ACAGCATTTC TTTAACAAAC GTCTATATGA TATTAGTAGT GCAGGACGTT ATAAATTTGA AAAGAAATTA CTATTAAGTG AACGTTTATA TCAAAAAGTA ATTGCACGTG ATATTATTGA CAAGAAGAAC AATATTTTAA TTCCAAAAGA TACATTAATT ACTAAAGAAC ATATTGAATT AATTAAAAAA GAATCACGAG ATAAAAACAT TAAGTGAACA AGAAAAATTA ATTTATTACC AATCGCTTTA GAAACTGAAA TTGAACAATT TTTAGAATAC GAAAGTATTG CAGTTTATAA AGATAATGAT TTAAGAGATG AAACAACAGA AATTGTTGGT TTAGCACCAG GTTGCAAACT ACAAACATTA ACTGTAGCTG ATTTAGTAGC AACTACAAGT TACATTTACA ATTTAAATTA TGAAATTGGT GAATTTGATG ATATTGATCA TTTAGGTAAT AAACGACTTA AATTAATTCA CGAATTACTA CGTGCACGTA TTGCTACAAG TATGGCTCGT ATTGAAAAAT TCATTAACGA AAAATTAGCT ATTTCAGATG GTTCAAGCAA TAACATTACT AATGTTAATG ATAAAGGAAT TGACACAGAA CTTGATCGTG AAGTTGAAGA AAGCGATATG AGTGATGAAG AAAAGAAAAA AGCAATTAGT GTTAAATCAA TTATTAATAC AAAGCAATTC CAAAGTCTTG TTAAAGACTT CTTTAATTCA CACCAATTAA TTCAATTTAT TGATCAACAA AACCCTTTAG CAGAGTTAAC TAATAAACGT CGTATTTCAG CGATGGGACC TGGGGGAATT AGTCGTGAAG ACCCTAACTT AGATATTCGT GACGTTCACC ACTCTCATTA TTCACGTATT TGTCCAATCG AAACACCTGA AGGTATGAAT ATTGGGTTGA TTATGTCTTT AGCATCACTT GCTAAAGTTG ATGAAAATGG TTTTATTGTT GCTCCTTATT ACGTTGTTGA AGATGGTGTC GTAAAAGAAG AATGCAAATA TTTAACAGCA CATGAAGATG ACAACTATAT TATTGCAGAA TCATCAGTTC AATTAGATGA AAATAAACGA ATTTTAGATG AACAAGTTGT TGCTCGTTAT CGTGGTTCAA CAGGTTTATT TAGTCCGCAT GAAGTTGATT TTATTGACAT CGTACCAAAA CAAGTTGTGT CAATTGCTGC TTCAGCAATT CCTTTCATTG AAAACGATGA TGGGGCACGT GCTTTAATGG GATCAAACAT GCAACGTCAA GCAACACCTT TAATTAAACC ATATGCACCA ATTGTGGGAA CAGGTACAGA ATTCAAAATT GCACACGACT CAGGAATGGC TGTTGTTGCT AAAAATGATG GTGTTGTTGA ATTTGTTGAT AGTCAAAAAA TTGTTATTAA AAACGATAAT GATAAATTAG ATGAATATAA ATTAATTAAA TATCGTAAGT CAAACCAAGA CACATGTAAT AACCAAATTC CAATTGTAAA AATTGGTCAA AAAGTTCACA AATCTGAAAC GATTGGTGAT GGACCTGCAA TGCAAAATGG AGAATTAGCT TTAGGACGTA ACATTCTAGT TGGTTATACA ACTTGACGTG GTTATAACTT TGAAGACGCA ATTATTATTT CTGAACGTTT AGTTGACCAA GATGTGTTTA CATCAATCCA TATTGATGAA CATACAATTC AATGTATGAA AACAAAAAAT GGTGATGAAG AAATTACACG TGATATGCCA AACGTTTCTG ATACTGCCAA ACGTTTCTTA GATAACCAAG GGATTGTTTT AGTAGGTGCT GAAGTACATG AAGGTGATGT TCTAGTTGGA AAAACAACAC CGCGTGGAAA TGTTGAAACT GCTCCAGAAG ATCGTTTATT ACAAACAATT TTTGGTGATA AATCAAAAAC AGTTAAAGAC TCATCTCTAA AAGTAAAACA TGGTCAAGAA GGTATTGTTG CAGCTGTTAA AAGAATTAAA TCAACTGATG AAAATGGTAG CGAATTACCA GATGACGTTA TCGAAATTAT TAAAGTTTAT ATTGTTCAAA AACGTAAAAT CCAAGTTGGG GATAAAATGG CTGGACGTCA TGGTAACAAA GGGATTGTTT CAAAAGTTGT ACCAATCCAA GATATGCCTT TCTTAAAAGA TGGAACACCA CTTGATATCA TGCTAAACCC ATTAGGTGTA CCTAGTCGTA TGAACATTGG CCAAATTTTA GAATTACACT TAGGTTATGC TGCTGCTGAA ATTGGTAAAA AACAATTAAT TCAAATTGCT ATTGATCAAT TAGGTTATGA AAAATATATT TCATTATTTG GAATTAATGA AATTATCGCT AAAAAGCTTT ATGAAAAGAT TACTAATTTA ATTAAACATA AACAAGCAAA ACAACCAAAA GATATTGATC TAATCGATAT TACTATTGTT TTAAAAGAAT TAGGACTATC ATATGATGAT ATTGGAATTA AAATTTCAAC ACCAGTATTT GATGGTGCTA ACCATGATGA CATTGTTGAT ATTATGAATG AAGCAAACAT TGATATTGAA AACAATAAAG GAAAACAAGT TTTATATGAT GGAAGAACTG GAGAAGCTTT TGATGGTTTA ATTTCAGTTG GATTAACATA CATGTTGAAA CTAGACCATA TGGTTGATGA TAAGATTCAT AGTCGTTCTG TTGGTCCATA TAGTAAGATT ACACAACAAC CATTAGGTGG TAAATCACAA AATGGTGGTC AACGTTTTGG TGAAATGGAA GTTTGAGCTT TAGAAGCTTA TGGTGCAGCC TATAACTTAT TAGAAATTCT AACTATTAAA TCAGATGATG TTCAAGGCCG TAATCAAGCA TATAATGCAA TTATAAAAGG TCATGATGTT GTTGCTGATG GAATGCCAGA ATCATTTAAA TTACTAACAA AACAAATGCA AGGGTTAGGA TTGTGTATTA CTGTTGAAAC AAAAGATGAT CGTATGATCG ACATTAACGA GTACACACTA AACCAAAATC GTTTAAATAA TGACGATGAT GAAGTTATTT TTGATGAAAG TATTAAAGAA ATTAATGAAA ATAATCAACA AGTATTTAAT ACAGACTTTA ATGATAACGA TTATGATGAT GAAGAAAACT TCTAA
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Protein sequence | MQNNKNYTEK FITDKVTRRD YSKIKSNFEG PNLLEIQVES FKRFMEKDLK EVISGIFPLK SPQGKYTLAF KGLKIKQPTK DESACRDEGK TFETPIYIDL ELTDNYTGEV KRAQRNAKTG EDGIYLGAIP KMTEKGTFVI NGIEKFVISQ IVRSPGIYVL GKSSIKLNGS RKRLFEGKIC EIYPSKGTLM LGYIPKDRHN IQIVARDSSG DNAQTFSITT LLKAFGLTSA EILKIFNNEK EIRESLEVEK YSPEYIFENS QENEIIFKIY SDAHDIHEKA DRRESNNKLR EEYIEQGSPL LSKLKELIFD YVEKSDEIDA LLHENKDVED ANFIKNNKKL YDEREEIINC IISEKAAKDI VELLGINIKN VETLRHLGKA SYQLALQQHF FNKRLYDISS AGRYKFEKKL LLSERLYQKV IARDIIDKKN NILIPKDTLI TKEHIELIKK ESRDKNIKWT RKINLLPIAL ETEIEQFLEY ESIAVYKDND LRDETTEIVG LAPGCKLQTL TVADLVATTS YIYNLNYEIG EFDDIDHLGN KRLKLIHELL RARIATSMAR IEKFINEKLA ISDGSSNNIT NVNDKGIDTE LDREVEESDM SDEEKKKAIS VKSIINTKQF QSLVKDFFNS HQLIQFIDQQ NPLAELTNKR RISAMGPGGI SREDPNLDIR DVHHSHYSRI CPIETPEGMN IGLIMSLASL AKVDENGFIV APYYVVEDGV VKEECKYLTA HEDDNYIIAE SSVQLDENKR ILDEQVVARY RGSTGLFSPH EVDFIDIVPK QVVSIAASAI PFIENDDGAR ALMGSNMQRQ ATPLIKPYAP IVGTGTEFKI AHDSGMAVVA KNDGVVEFVD SQKIVIKNDN DKLDEYKLIK YRKSNQDTCN NQIPIVKIGQ KVHKSETIGD GPAMQNGELA LGRNILVGYT TWRGYNFEDA IIISERLVDQ DVFTSIHIDE HTIQCMKTKN GDEEITRDMP NVSDTAKRFL DNQGIVLVGA EVHEGDVLVG KTTPRGNVET APEDRLLQTI FGDKSKTVKD SSLKVKHGQE GIVAAVKRIK STDENGSELP DDVIEIIKVY IVQKRKIQVG DKMAGRHGNK GIVSKVVPIQ DMPFLKDGTP LDIMLNPLGV PSRMNIGQIL ELHLGYAAAE IGKKQLIQIA IDQLGYEKYI SLFGINEIIA KKLYEKITNL IKHKQAKQPK DIDLIDITIV LKELGLSYDD IGIKISTPVF DGANHDDIVD IMNEANIDIE NNKGKQVLYD GRTGEAFDGL ISVGLTYMLK LDHMVDDKIH SRSVGPYSKI TQQPLGGKSQ NGGQRFGEME VWALEAYGAA YNLLEILTIK SDDVQGRNQA YNAIIKGHDV VADGMPESFK LLTKQMQGLG LCITVETKDD RMIDINEYTL NQNRLNNDDD EVIFDESIKE INENNQQVFN TDFNDNDYDD EENF
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