Gene Rleg2_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_2019 
Symbol 
ID6980758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp2081200 
End bp2082267 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content62% 
IMG OID643396741 
Productdiguanylate cyclase 
Protein accessionYP_002281529 
Protein GI209549612 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGG CTGTCGCGCC CAAGGTGCAG GTTCCCGATG TTGCGGGCCA GATCACCTAT 
GCCATGCGCT CGATGGGCGT TGCGCCGATA CCGCGCAATT ACGAACTCTT CTACGAGGCA
TATATCGGCT CCAATCCGGC GCTCACCCGC GAGCTTTCAG CGCTCGGCAG CCAGGCGACA
CAGGCCGAAC TCGACGCGCT CGGCGCGCAA TATTTCACCA GCAGCCCGGC TCGCGTCGTC
GATGACGCCC ATACCCGCAT ATCAGGCGAA CTCGACGGCC TGCTGCGGAT CCTGAGGCAG
GAGCAAAGTT CGCTCGAAAG CTATACCAGG CTGCTCGGCG AGACCCATAA GCGCATCACT
TCCAAGAGCA ATGCCAGCGT CGAGCTGATC GAAAACGCCA TCGAACTTTT GAGCCAGGCG
ACCGGCGACA CCATGGCGCA TGGCGAACGC ACCGTCGAGG ACGTCGTCCA GCGCTCGCAG
GAAATGGACC AAGTCCGCAA GGAACTCGAC GAATACAAGC GGATCGCCAA CACCGATTCG
CTGACGCGCC TGTCCAACCG CCGCGCCTTC GACGAACGCC TCGCCGCCGT CTTCAACAAT
CCCGGCATGC GGCCGGTGAC GGCCCTGCTG CTCGCCGACA TCGACAACTT CAAGAAGATC
AACGACACCT ATGGCCATCC CGTCGGCGAC AAGATACTTG CCACCGTCGC CTCCGTCATC
CGCAGCAACG TCCGGCGCGA CGTCTTCGTT GCCCGTGCCG GCGGCGAGGA ATTCGCCCTC
ATCATCGACG GCAATACGCC CGAGGAAATC ACGGCAATCG CCGAGCGCAT CCGCCGCACG
CTGGAAACGA CCCCGTTCAA GAATTCGCGC ACGCGGGTTA ATTACGGACC GATCACCGTC
TCGATCGGCA TCTGCATGGC CTCCAGCGCC GAGGATGCCG GCGAACTCTA CAGCAAGACC
GACATCGCCC TTTACGGCGC CAAGAATGCC GGCCGCAACT GCACCATCCT CTATCAGGAC
GGCATGCAGA AGGATTTCAC CAAGAGCTGG CTGATCTACA AGACCTGA
 
Protein sequence
MNTAVAPKVQ VPDVAGQITY AMRSMGVAPI PRNYELFYEA YIGSNPALTR ELSALGSQAT 
QAELDALGAQ YFTSSPARVV DDAHTRISGE LDGLLRILRQ EQSSLESYTR LLGETHKRIT
SKSNASVELI ENAIELLSQA TGDTMAHGER TVEDVVQRSQ EMDQVRKELD EYKRIANTDS
LTRLSNRRAF DERLAAVFNN PGMRPVTALL LADIDNFKKI NDTYGHPVGD KILATVASVI
RSNVRRDVFV ARAGGEEFAL IIDGNTPEEI TAIAERIRRT LETTPFKNSR TRVNYGPITV
SIGICMASSA EDAGELYSKT DIALYGAKNA GRNCTILYQD GMQKDFTKSW LIYKT