Gene Rleg2_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1550 
Symbol 
ID6980284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1576427 
End bp1577005 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content62% 
IMG OID643396273 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_002281066 
Protein GI209549149 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.666809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA GGATTTCATC GAACGAATAC TCCGACCTTG ACGAGCTATC GGCAGAGGCG 
GTCGATCTTG TTGAAATCAC CGGCGTCGTC AAGTGGTTCG ACGTCGCTAA GGGTTTCGGC
TTCATCGTGC CCGACAACGG CATGCAGGAT GTTCTCCTGC ACGTGACCTG CCTGCGCCGC
GACGGTTACC AGACGATCCT CGAGGGAACG CGCATCGTCG CCCTCATCCA GCGTCGCGAA
CGTGGCTACC AGGCTTTCAA GATCCTTTCG ATGGATCAGT CGACTGCGGT TCATCCCTCG
CAACTGCCGC CGGTGCGCAC ACATGTGCAG GTCACCGCGA CGAGCGGCCT TGAGCGTGCG
CTGGTCAAAT GGTTCAACCG CACCAAGGGC TTCGGCTTCC TGACGCGCGG CGAGGGCACG
GAAGACATCT TCGTGCACAT GGAAACGCTC CGCCGCTTCG GCCTGACGGA ACTGCGCCCC
GGCCAGGTTG TGCTCGTCCG CTTCGGCGAC GGCGAAAAGG GCCTGATGGC CGCGGAAATC
CATCCCGACA TTCCGAGCCC GGCCAGCCGG TCGCATTGA
 
Protein sequence
MADRISSNEY SDLDELSAEA VDLVEITGVV KWFDVAKGFG FIVPDNGMQD VLLHVTCLRR 
DGYQTILEGT RIVALIQRRE RGYQAFKILS MDQSTAVHPS QLPPVRTHVQ VTATSGLERA
LVKWFNRTKG FGFLTRGEGT EDIFVHMETL RRFGLTELRP GQVVLVRFGD GEKGLMAAEI
HPDIPSPASR SH