Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_2073 |
Symbol | truB |
ID | 6975500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 2299618 |
End bp | 2300538 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643391603 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_002276448 |
Protein GI | 209544219 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.427039 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGCA AGCGCGGACG CCCGATCGAC GGCTGGCTGG TCATCGACAA GCCGTCGGGC ATGACATCGA CCGATGTCGT CAACCGGGTG AAGCGCCTGT TCGACGCCCG CAAGGCGGGG CACGGCGGCA CGCTGGACCC GCTGGCGACG GGGCTGCTGC CCATCGCCTT CGGCGCGGCC ACCAAGACCG TGCCCTACAT CATGGACGGC ACCAAGCGCT ATGAATTCAC CCTGCGCCTG GGCGAGGCCC GCGACACCGA CGACGCCGAG GGCGCGGTGA TCGAAACGTC CGACGTCCGC CCGACCGACG ATGCGTTCCG CGCGGCGCTG CCGGCCTTTC GCGGCGACAT CATGCAGGTG CCCCCCATCT ATTCCGCGAT CAAGGTGGCG GGCGAGCGCG CCTATGACAT GGCGCGCGAG GGCCGGGCCC CCGACCTGCC GCCCCGCCCG GCGCGGGTCG ACCGGTTCGA CCTGGTGGCG CGCCCGGACG CCGACACCGC GATCTTCGCC GTCGAATCCG GCAAGGGCGT CTATATGCGC TCGCTGGCGC GCGACATCGC GCGGGCATGC GGTACCGTGG GGCACGTGGC GGCGCTGCGC CGGCTGCGGG TCGGCCCGTT TTCCGAGGCG GATGCAATTC TTCTGGACAA AATTGTCCCA AGCGACGACA ACGCGCCTGC CTCACCGGAT CTGCTGCTTC CGGTCGCGAC CGCGCTGGCC GACATCCCGG CGCTGGCCTT GACCCATGAA GAAGCGGATG CCCTGTCACA CGGGCGGGCG GTCAGCCTGC TCGACCTGAT GGGACGGATA CCGGACGCCG TCGATCCCGC ATGCGGGATC GTGCGGGGAA TGGACGGGGC GCGCGTGATC GGGCTCTGCC GGCTGGAAGA TGGCTGGCTG CGTCCGGACC GCATGCTTTA A
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Protein sequence | MRRKRGRPID GWLVIDKPSG MTSTDVVNRV KRLFDARKAG HGGTLDPLAT GLLPIAFGAA TKTVPYIMDG TKRYEFTLRL GEARDTDDAE GAVIETSDVR PTDDAFRAAL PAFRGDIMQV PPIYSAIKVA GERAYDMARE GRAPDLPPRP ARVDRFDLVA RPDADTAIFA VESGKGVYMR SLARDIARAC GTVGHVAALR RLRVGPFSEA DAILLDKIVP SDDNAPASPD LLLPVATALA DIPALALTHE EADALSHGRA VSLLDLMGRI PDAVDPACGI VRGMDGARVI GLCRLEDGWL RPDRML
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