Gene Gdia_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1800 
Symbol 
ID6975222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1994820 
End bp1995542 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content72% 
IMG OID643391325 
Productprotein of unknown function DUF45 
Protein accessionYP_002276175 
Protein GI209543946 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.322708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.410252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCG GCCTCTCCAG CCCGGAGCAG GTGGGGGAGG AGAATATCCG GCTGGCGGGG 
CGCGACATTC CCGTCCGCTG GCGCCGGTCC GCCCGCGCGC GGCGCGTTTC GCTGCGGATC
GATCCGCGCA GCCCGGCCGT CGTCGTCACC CTGCCGCCCC GCGTGGGGCG CGAGGCCGGA
CTGGCCCTGC TGCGGACCCA TGCCATCTGG ATAACGACGC GGCTGGACCG CCTGCCGGCG
GAATCGCCGT GGCATGACGG CGGCCAGGTG CTGCTGGACG GACATCCGCA TACGATCCGC
CATTGCCCCG ACGGACGGCG CGGCGTGTGG ATCGAGGGGG ATACCGTCAT GGTCAGCGGC
GAGGCCCCGT TCCTCCGTCG CCGCCTGGCC GCCTTCCTGC GGCAGGAGGC CGGGCGCCGG
CTGGGCGCGC GCATGGCGCT GCTGGCCGAC CAGTCCGGCC TGCGTCCCCG GCGGCTGACG
GTCAAGGATA CCAGCAGCCG CTGGGGCAGT TGCACATCCG ACGGCTCGGT GATGCTGAGC
TGGCGCCTGC TGATGGCCCC GGCAGAAATC CAGCACTACG TCATCGCCCA TGAACTGGCG
CATCTGCGGC ACCTGAATCA CGGGCCCGAT TTCTGGATGC TGGTTACCAG CCTGACCCCC
CATCGCCACA CGGCCGAAGC CTGGCTGCGC CGTCACGGCC CCGCCCTGCT GCGCGCGTCG
TGA
 
Protein sequence
MMAGLSSPEQ VGEENIRLAG RDIPVRWRRS ARARRVSLRI DPRSPAVVVT LPPRVGREAG 
LALLRTHAIW ITTRLDRLPA ESPWHDGGQV LLDGHPHTIR HCPDGRRGVW IEGDTVMVSG
EAPFLRRRLA AFLRQEAGRR LGARMALLAD QSGLRPRRLT VKDTSSRWGS CTSDGSVMLS
WRLLMAPAEI QHYVIAHELA HLRHLNHGPD FWMLVTSLTP HRHTAEAWLR RHGPALLRAS