Gene ECH74115_B0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_B0084 
Symbol 
ID6966404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011350 
Strand
Start bp54219 
End bp54680 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content49% 
IMG OID643383982 
Productnuclease homolog 
Protein accessionYP_002268461 
Protein GI209395616 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.381949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAAT ATATTCCACT GGTATTATTT ATCTTTTCAT GGCCGGTATT GTGTGCAGAT 
ATTCATGGAC GGGTTGTTCG TGTACTGGAC GGTGATACCA TCGAGGTCAT GGACTCACGG
AAGGTGGTGC GGATCAGGCT GGTAAATATT GATGCGCCGG AAAAGAAACA GGATTATGGC
CGGTGGTCGA CAGACATGAT GAAATCACTG GTTGCAGGAA AAACGGTTAC CGTCACATAT
TTTCAGCGAG ATCGTTATGG TCGTATGCTC GGGCAGGTTT ATGCACCAGA CGGAATGAAT
GTTAATCAGT TTATGGTCCG GGCCGGGGCC GCCTGGGTAT ATGAGCAGTA CAACACAGAT
CCCGTGCTGC CTGTCCTTCA GAACGAAGCC AGACAACAAA AACGTGGGCT CTGGTCAGAT
GCTGATCCGG TTCCCCCCTG GATATGGAGA CACCGTAAAT AA
 
Protein sequence
MRKYIPLVLF IFSWPVLCAD IHGRVVRVLD GDTIEVMDSR KVVRIRLVNI DAPEKKQDYG 
RWSTDMMKSL VAGKTVTVTY FQRDRYGRML GQVYAPDGMN VNQFMVRAGA AWVYEQYNTD
PVLPVLQNEA RQQKRGLWSD ADPVPPWIWR HRK