| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II1067 |
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| Symbol | potE |
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| ID | 6962588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 1162002 |
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| End bp | 1163321 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643382309 |
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| Product | putrescine transporter |
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| Protein accession | YP_002265340 |
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| Protein GI | 209809801 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAA AATCTAAAAT GGGCGTAGTT CAACTTACGG TCCTTACTTT TATTAACATG
GCTGGATCCG GCATTATTAT GCTGCCAAGT AAATTGGCAC AAGTGGGTTC CATCTCAATT
ATTTCTTGGC TTGTTACTGC GATTGGTTCC ATGAGTTTAG CGTATGTTTT TGCCAAATGT
GGGCGATTTA GTAAACGTCC GGGTGGTATG AATGGTTATG CCTCTTATGC TTTTGGTGAT
TCAGGCGCGT TCATGGCGGG ATGGACTTAT GGTCTTTCTT TATTGATTGC GAACATTGCG
ATTGCGATTA CGTCGGTGGG TTATGCCCAA GCGTTCTTTG AGATCTCATT GACTCCGATT
CAAACGTGTA TAGCAACGAT TAGTGTGTTG TGGTTATGTA CTGTTGCAAA TTTTGGTGGC
GCAAAAGTAA CAGGACAAAT TGGTACTTTT ACGGTATGGG GCGTTATTTT ACCTGTATGT
AGCTTAGGAA TAATTGGATG GTTCTGGTTT AGTCCTGAAA TGTACGTTAA CTCTTGGAAT
CCACACAGTT TACCCTTTGG TGATGCGGTG AGCGCATCGA TAGCTATGAC GCTTTGGGCG
TTTTTTGGGT TGGAATCTGC ATGTGCAAAC AGTGACTCTG TTGAAAATCC AGAGAAGAAC
GTTCCTATCG CAGTGCTTTG CGGTACGTTA ATTGCGGCGG TGGTTTATAT TGTTTCTACT
AACATTTGTG CGGGTATTGT TGAAAATGGA GCTCTAGCAG CATCAACGGC ACCATTCAGT
TTGGTATGGC AAGTTATGTT AGGGTCTTGG GCTGGTAAAG CGGTTGCTGG TTTAGCTGTG
ATTGCATGTA CTGGGTCTTT ACTAGGGTGG CAGTTTACTA TCGCCTCTGT GTTTAAAAGC
TCGGCTGATG AAGGTTTCTT TCCAAAGGTA TTCTCTGAAA TTGATAAACG AGGAACACCT
GTAAAAGGAA TGATCATTAT TACGGTGATT CAAACGGTAT TATCGCTAAT GACAATCAGT
CCAACGTTGA ACGAGCAATT TGAATCGTTA GTCAACTTAG CGGTGGTTAC CAACGTCGTG
CCTTATATCC TATGTATGGC AGCTATCTTC ATTATGCAAA AGTTCGCTCA TGTTAGTAAA
AAAGAGATGA GTAAAACGAA TTTTATTGCG GTTGTGGCGG CAGTATACAG TTTTTATGCT
CTTTATGGGG CGGGTTATGA TGCAATGATG TGGGGGTCTA TTGTTACTTT CCTTGGTTGG
ACTATGTATG GTTTTATTGC ATACAAACAT GAAGACGTAG AAGCAGAAGA AGTTAGATAG
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| Protein sequence | MTQKSKMGVV QLTVLTFINM AGSGIIMLPS KLAQVGSISI ISWLVTAIGS MSLAYVFAKC
GRFSKRPGGM NGYASYAFGD SGAFMAGWTY GLSLLIANIA IAITSVGYAQ AFFEISLTPI
QTCIATISVL WLCTVANFGG AKVTGQIGTF TVWGVILPVC SLGIIGWFWF SPEMYVNSWN
PHSLPFGDAV SASIAMTLWA FFGLESACAN SDSVENPEKN VPIAVLCGTL IAAVVYIVST
NICAGIVENG ALAASTAPFS LVWQVMLGSW AGKAVAGLAV IACTGSLLGW QFTIASVFKS
SADEGFFPKV FSEIDKRGTP VKGMIIITVI QTVLSLMTIS PTLNEQFESL VNLAVVTNVV
PYILCMAAIF IMQKFAHVSK KEMSKTNFIA VVAAVYSFYA LYGAGYDAMM WGSIVTFLGW
TMYGFIAYKH EDVEAEEVR
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