| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0965 |
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| Symbol | luxR |
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| ID | 6962511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 1055927 |
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| End bp | 1056673 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 643382223 |
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| Product | transcriptional activator protein LuxR |
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| Protein accession | YP_002265254 |
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| Protein GI | 209809715 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.266935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTATA TCGCTCCTCA TGACACATTA AAAATCATCA CTAAAATAAA TTCATCAAGC
AGTAATGATC AAATTAATCA ATGTTTAATA GAAGTAGCTA ACACTCTTAA TTGTGAATAT
TATTTGTTTT CTATAATTTC TAATAAATCC ATGATAAAAC CAGATGTGTT GATCTTAGAT
AATTACCCAC AAAAATGGCG CGATCATTAT GATGAGACCA ATTTAATTAA ATATGACCCT
ATTGTAGATT ACTGTTTTTT TAATCACTCA CCTATTCTTT GGGACATATT TGGAAAAAAA
ACACTCAAAA CAAACAAGCC TAACGTAATC CAAGAAGCAA AATCATTGGG ATTATACTCA
GGGTTTAGTT TTCCAATTCA CTCTGTAAAT GGAAGCTTTG GAATGATTAG CTTTGCTCAT
TCAAATAAAA AACAATCTAC TGACTGTCTC TTTTCCACGG CTTGTATGTA TATACCTCTT
ATTATCCCAG CTCTTTTAGA TAGTTATTAT CGGATTAACA AAAATAATAC TGAATCAACT
CATGATTTAA CAAAGCGAGA AAAAGAATGT TTAGCATGGG CTTGCGAAGG GAAAAGTTCG
TGGGAAATAT CGATCATTCT TGGATGTACA GAACGCACTG TCGCGTTTCA TTTAACTAAT
TCACAAACAA AACTTGGCAC AACTAATCGC TGCCAAAGCG TGTCAAAAGC AATCTTAACA
GGGGCGATCA ATCCAGCGTA TTCATAA
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| Protein sequence | MNYIAPHDTL KIITKINSSS SNDQINQCLI EVANTLNCEY YLFSIISNKS MIKPDVLILD
NYPQKWRDHY DETNLIKYDP IVDYCFFNHS PILWDIFGKK TLKTNKPNVI QEAKSLGLYS
GFSFPIHSVN GSFGMISFAH SNKKQSTDCL FSTACMYIPL IIPALLDSYY RINKNNTEST
HDLTKREKEC LAWACEGKSS WEISIILGCT ERTVAFHLTN SQTKLGTTNR CQSVSKAILT
GAINPAYS
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