| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2946 |
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| Symbol | uspA |
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| ID | 6987986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3192315 |
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| End bp | 3192740 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643381224 |
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| Product | universal stress protein A |
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| Protein accession | YP_002264274 |
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| Protein GI | 209696343 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTATA AACATATTCT TGTTGCTGTC GATTTAACAG AAGAGAGTAA GTCACTGGTC
ACTAAAGCGG TTGGTTTAGC CAAGGCTCTT GATGCGAAAG TCTCTTTTAT TCACATTGAT
GTTAGCTATG CAGAATTATA TACCGGATTA ATTGATATTA ATCTGGCTGA AACACAACAC
CAAGCAATGG AAGCATCGCA CGAAGCCATG AAGCATTTAG TGACCTTTGC AGATTATCCA
ATTCATAAAA CATTGGTAAG TAGTGGGGAT CTAAGCAGTG AGTTGTGCGA AGCAATTGAA
AACTTAGATG TAAACCTTGT GGTTTGTGGT CATCACCAAG ATTTCTGGAG TAAATTATTA
TCATCAACCA GACAAGTGAT CAACACCTGT CCAATTGACG TTCTTGTTGT GCCATTTAAA
GATTAA
|
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| Protein sequence | MSYKHILVAV DLTEESKSLV TKAVGLAKAL DAKVSFIHID VSYAELYTGL IDINLAETQH
QAMEASHEAM KHLVTFADYP IHKTLVSSGD LSSELCEAIE NLDVNLVVCG HHQDFWSKLL
SSTRQVINTC PIDVLVVPFK D
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