| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2312 |
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| Symbol | flaK |
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| ID | 6988512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2484953 |
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| End bp | 2486434 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380589 |
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| Product | sigma 54 dependent transcription regulator |
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| Protein accession | YP_002263673 |
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| Protein GI | 209695743 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGTT TAGCAAAGAC ACTAATTATT GAAGATGACG ATCAGAACCG ACATAATCTT
GAGGTAATTC TTGAGTTTAT TGGCGAGCAT TGTCATGCTA TCTCAACATC AGAACTGTCT
ACTTTTGACT GGAGTGATCC TTGGAGCGCA TGCTTTTTAG GTCAAGTTAC TGATGAATCT
TTAAAAAAAT CAATCAAACA CTCACTGGTT TCTCATAACC ATATTCCCGT TATCATGATT
GCGGGGGCTA CGCATGATAT TGAGGATTTA ACCAACTATG TGGGTGAATT GAATCAACCG
ATTAACTATC CTCAACTGAC AGATGCCTTG CGTCATTGTC AAGAATTCAT GGGTCGTCGT
GGCTTAGGTA TTCCTCATCT TGGTAGAAAA AATACGTTAT TTCGTAGTAT GGTTGGACAA
AGTTCAGCGA TTAGCGCCGT TCGTCATTTG ATTGAGCAAG TGTCTGGTAC CGAAGCAAGT
GTACTTGTAT TGGGTGAATC TGGTACGGGT AAAGAAGTGG TTGCTCGTAA TCTGCATTAT
CATTCTCCTC GTCGTAAAGG ACCATTTGTA CCGGTTAACT GTGGTGCGAT TCCTCCTGAT
CTTCTTGAAA GTGAACTCTT TGGTCATGAA AAAGGCGCAT TTACTGGGGC AATCACTGCT
CGTAAAGGTC GTTTTGAATT GGCTCAAGGT GGTACGCTTT TCTTAGATGA AATCGGTGAT
ATGCCAATGT CGATGCAAGT GAAGTTACTT AGAGTACTTC AAGAGCGTTG TTTTGAGCGT
GTTGGTGGTA ATCAAAGTAT TAAAGCGGAT GTACGTATTG TTGCGGCAAC GCATCGTAAT
CTTGACGACA TGATTGAAAA TAACAGTTTT CGTGAAGATC TTTATTACCG CTTAAATGTC
TTCCCAATTG AAATGCCTGC TTTGCGTGAA CGTAAACAGG ATATTCCGTT ATTACTGCAA
GAATTACTGA CAAGAATGGA AGCGGAGGGC AGTACTCGTG TGCGCTTAAC GCCTCGTGCT
GTTAATTCAT TAATGGAACA CCATTGGCCG GGTAACGTTC GTGAACTGGC GAATTTAATT
GAACGCTTAA TGATCTTATT TCCTGGTGAG TCGGTTGACG TTAATCATTT ACCCACTAAG
TATCGTTACA GTGATATTCC TGAATTCCAG CCAGAAAACC ACAATCAACA AAGTATTGAA
GAGCAAGAGC AAGCTGCGTT AGCGGATATG TTTGCAAACT TCAATGATGA TGGTGTACCT
CAAGTAAATA ATCAAAGTTT TGGGCCTTCT TCAAGTGATT TACCTGAAGA TGGATTAAAT
CTAAAAGAGA TGCTTGCGGA TGTCGAAGTT AATATGATCT GCCAAGCATT AGAAGCTCAG
AACGGCATCG TTGCTCGTGC TGCTGATATG TTAGGTATGC GCCGTACAAC TCTTGTTGAG
AAAATGCGTA AATACAATTT AAATAAAGAT GACGTCAGAT AG
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| Protein sequence | MQGLAKTLII EDDDQNRHNL EVILEFIGEH CHAISTSELS TFDWSDPWSA CFLGQVTDES
LKKSIKHSLV SHNHIPVIMI AGATHDIEDL TNYVGELNQP INYPQLTDAL RHCQEFMGRR
GLGIPHLGRK NTLFRSMVGQ SSAISAVRHL IEQVSGTEAS VLVLGESGTG KEVVARNLHY
HSPRRKGPFV PVNCGAIPPD LLESELFGHE KGAFTGAITA RKGRFELAQG GTLFLDEIGD
MPMSMQVKLL RVLQERCFER VGGNQSIKAD VRIVAATHRN LDDMIENNSF REDLYYRLNV
FPIEMPALRE RKQDIPLLLQ ELLTRMEAEG STRVRLTPRA VNSLMEHHWP GNVRELANLI
ERLMILFPGE SVDVNHLPTK YRYSDIPEFQ PENHNQQSIE EQEQAALADM FANFNDDGVP
QVNNQSFGPS SSDLPEDGLN LKEMLADVEV NMICQALEAQ NGIVARAADM LGMRRTTLVE
KMRKYNLNKD DVR
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