| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1798 |
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| Symbol | |
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| ID | 6987379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1921280 |
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| End bp | 1921921 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380105 |
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| Product | amino acid transport protein, LysE type |
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| Protein accession | YP_002263202 |
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| Protein GI | 209695273 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.701098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATTA ACGTGATTCT TGATTTTTGG GCGTTTTTTA TCGCTATTCT CTTATTAACG
ATGACACCGG GGTTGGATAC TGCTCTGGTT ATTCGTAATA CCACGCGTGG TGGCTGGAAA
GACGGCATTA CTTGCAGTTT TGGTATTTGT TGTGGCTTGT TTGTGCATGC CACTATGTCA
GCCATTGGTT TGTCAGTGTT GCTAGTCAGC TCTTCTGAGT TGTTTACTGT GATAAAAACC
ATCGGTGCTA TCTATTTGAT ATGGTTAGGT ATTCAATCAA TAAGAAGTAC GTTTAAAGCA
GGGGCAGGGC TGACGATAGA AAAGAACGTA TCGCATGAAG ACATACCTTT AACGCTTTCG
TTTAAAGAGG GTTTTTTATC TAATATTTTA AATCCAAAAA CGGCGGTTTT CTATTTGGCA
TTATTGCCTC AATTTATTAA CCCTGAATAT AATGCGTTTC TTCAATCTTT ATTGATGGCG
AGCATCCATT TTATTATTGC GATGTGTTGG CAGGGAGGGA TTGCGTTGTT GGTTGAAAAA
GCAAAGCAGT TTATGTCTAG CCCAACAGTT ACAAAAAGAA TTGAAAGGAT CACGGGGGGA
GTATTAATTG CCTTGGGTTT CAATTTGTTG GTTTCAAAAT AA
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| Protein sequence | MDINVILDFW AFFIAILLLT MTPGLDTALV IRNTTRGGWK DGITCSFGIC CGLFVHATMS
AIGLSVLLVS SSELFTVIKT IGAIYLIWLG IQSIRSTFKA GAGLTIEKNV SHEDIPLTLS
FKEGFLSNIL NPKTAVFYLA LLPQFINPEY NAFLQSLLMA SIHFIIAMCW QGGIALLVEK
AKQFMSSPTV TKRIERITGG VLIALGFNLL VSK
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