| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0986 |
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| Symbol | |
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| ID | 6988830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1089894 |
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| End bp | 1090364 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643379374 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_002262477 |
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| Protein GI | 209694549 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTTC AATTAATTGC TGTTGGCACT AAAATGCCTA AATGGGTAGA AGAAGGTTAT
AAAGAATATA GCCGTCGCTT CCCAAAAGAC ATGCCTCTTG AACTTATAGA GATCACCGCA
GGTAAACGCG GTAAAAATGC AGATATAGCA CGAATTCTTC AAAAAGAAGG AGAAGCAATG
CTTGCTGCCG TTCCTAAAGG AAACCGCATT GTCACGTTAG ACATCCCAGG TAAACCTTGG
AATACAGAAC AACTAGCAGA ACAATTAGAA GTCTGGAAAT TAGATGCTCG CGATGTATCA
ATTCTTATTG GTGGTCCTGA AGGTTTATCT CCCGCTTGTA AAACCGCAGC AGAGCAAAGT
TGGTCTTTGT CACCATTAAC GCTTCCTCAC CCTCTTGTTC GTGTAGTTAT GGCTGAAAGC
CTGTACCGAG CATGGAGTAT TACGGCCAAC CACCCTTACC ACAGAGAATA A
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| Protein sequence | MKLQLIAVGT KMPKWVEEGY KEYSRRFPKD MPLELIEITA GKRGKNADIA RILQKEGEAM
LAAVPKGNRI VTLDIPGKPW NTEQLAEQLE VWKLDARDVS ILIGGPEGLS PACKTAAEQS
WSLSPLTLPH PLVRVVMAES LYRAWSITAN HPYHRE
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