Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2558 |
Symbol | |
ID | 6878557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2532066 |
End bp | 2532491 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642790415 |
Product | methionine-R-sulfoxide reductase |
Protein accession | YP_002220959 |
Protein GI | 198284638 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0971304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.867883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTT CATCCGCAGG CTTTGATCTG ACCCCCATCG ATGCCGGGAA GCGCGCGGAA ATGGCGCAAG GCTTGTCTGC CGAGGCGCGT CATGTCCTTT TTGAGCATGG CACGGAGCCG CCCTTCTGCG GTGGGCTGCT GCACGAACAG GGCGACGGGA CTTTCGTTTG CGCTCTGTGT GGGTTGCCGT TGTTTCGTTC GGCGGCCAAG TTTGATTCGG GGACGGGCTG GCCGAGTTTT CGGGAGCCTT TTGCACCCGA TCATATCCAC GAGATCCGCG ATACCAGTCA TGGCATGGTC CGCACGGAAA TCCGCTGCGC GCGTTGCGAC AGCCACCTGG GGCATGTGTT TTCCGATGGT CCGGCCCCGA CGGGGCGGCG CTACTGTTTG AATTCGGCGG CGCTGCGCTT TCAAAGGACG ACATAA
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Protein sequence | MTRSSAGFDL TPIDAGKRAE MAQGLSAEAR HVLFEHGTEP PFCGGLLHEQ GDGTFVCALC GLPLFRSAAK FDSGTGWPSF REPFAPDHIH EIRDTSHGMV RTEIRCARCD SHLGHVFSDG PAPTGRRYCL NSAALRFQRT T
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