Gene Lferr_2174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2174 
Symbol 
ID6878165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2157610 
End bp2158731 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content58% 
IMG OID642790033 
ProductRadical SAM domain protein 
Protein accessionYP_002220585 
Protein GI198284264 
COG category[S] Function unknown 
COG ID[COG1856] Uncharacterized homolog of biotin synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value6.64459e-10 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACCCAT GGTTGAACGC TGTTGCGCAA GTAGAGGCTT TGGAGGATCT GGTCCTCAAT 
GCGGATCTGG TGGACTCTAT GCGCGAACGG TGGTCCGGTC TGTCCGGTAG TCAGGTGGGT
CGTATCAATT TCTATACGCC TTCTTTCAAG CACCATGAAA CGTCCGAAGT TTCCGCCTGC
GGGAAGAATG CTTTTCCGGC CATATCCATC ACCGGTGGTG ATTGCAAGTT GCAGTGTGAC
CACTGTAAGG CGAAGATTCT GGAGCCGATG ATTCCGGTGC GCACGCCGGA AGAACTGGAT
CGTCTGGTGG ACCGGATCGT CCTGGATGGG GGCCGTGGGC TGCTGCTTTC AGGAGGTTCG
GACCATCAGA ACGTGGTCCA CTATGAACCC TATTTCCCGA CGGTGCGCAA GATCAAGGAT
CGCTATCCGA ATTTACAGAT CGCCATGCAT ACGGGTATCG CCACCCCGGA GTTCGCGCGT
GGGATGGAGG ATGCGGGTGT CGATGTGGCC ATGATGGATG TGATCGGTGC CCAGGACACC
ATCAACCAGG TCTACCATTT GCGCCGTTCG GTGGATGATT TTGAGGCGGC GCTGGAGGCA
TTGGTGGCCA CCAGGATGAA AGTGGTGCCG CATATCGTCA TCGGGCTGCA TTACGGTGAA
TTGCTCGGTG AGTGGAACGC TCTTGAAATT ATCCAGCGGC ATCTGCCCAG TGCCCTGGTG
CTGGTGGTGA TCATGCCGCA GTATGCCGCT TCGAGCCGGC CTTTCGCGAC GCCAGCGGCG
GATGAAATTG GTAAATTCTT TATGGATGCG CGGGCTGCGC TGCCGGAAAC ACCGGTATTG
CTGGGCTGCG CACGGCCTTC CGGGGTGCAT CGTTCCATCA CCGATACCTA TGCGGTCATG
GCGGGACTGA ACGGGGTGGC CTTCCCCTCT GATGGCATGC TGGCCCTCGC CAAGCACCTG
GAACGGGATG TCTTTGTGAC ACCGTCCTGC TGCTCCATGA TTGTCGGTGA AGAAGTCCTG
GCGCTCGGTG ACGAGACGAC CACTGTGCCT CTGGATTATG TCCCCGCCGC GCCGAAACGT
CGCCCACAAC TGCGGGATAT CCCGATTGTG TTTACGGCCT GA
 
Protein sequence
MNPWLNAVAQ VEALEDLVLN ADLVDSMRER WSGLSGSQVG RINFYTPSFK HHETSEVSAC 
GKNAFPAISI TGGDCKLQCD HCKAKILEPM IPVRTPEELD RLVDRIVLDG GRGLLLSGGS
DHQNVVHYEP YFPTVRKIKD RYPNLQIAMH TGIATPEFAR GMEDAGVDVA MMDVIGAQDT
INQVYHLRRS VDDFEAALEA LVATRMKVVP HIVIGLHYGE LLGEWNALEI IQRHLPSALV
LVVIMPQYAA SSRPFATPAA DEIGKFFMDA RAALPETPVL LGCARPSGVH RSITDTYAVM
AGLNGVAFPS DGMLALAKHL ERDVFVTPSC CSMIVGEEVL ALGDETTTVP LDYVPAAPKR
RPQLRDIPIV FTA