Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2174 |
Symbol | |
ID | 6878165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2157610 |
End bp | 2158731 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642790033 |
Product | Radical SAM domain protein |
Protein accession | YP_002220585 |
Protein GI | 198284264 |
COG category | [S] Function unknown |
COG ID | [COG1856] Uncharacterized homolog of biotin synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000664459 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACCCAT GGTTGAACGC TGTTGCGCAA GTAGAGGCTT TGGAGGATCT GGTCCTCAAT GCGGATCTGG TGGACTCTAT GCGCGAACGG TGGTCCGGTC TGTCCGGTAG TCAGGTGGGT CGTATCAATT TCTATACGCC TTCTTTCAAG CACCATGAAA CGTCCGAAGT TTCCGCCTGC GGGAAGAATG CTTTTCCGGC CATATCCATC ACCGGTGGTG ATTGCAAGTT GCAGTGTGAC CACTGTAAGG CGAAGATTCT GGAGCCGATG ATTCCGGTGC GCACGCCGGA AGAACTGGAT CGTCTGGTGG ACCGGATCGT CCTGGATGGG GGCCGTGGGC TGCTGCTTTC AGGAGGTTCG GACCATCAGA ACGTGGTCCA CTATGAACCC TATTTCCCGA CGGTGCGCAA GATCAAGGAT CGCTATCCGA ATTTACAGAT CGCCATGCAT ACGGGTATCG CCACCCCGGA GTTCGCGCGT GGGATGGAGG ATGCGGGTGT CGATGTGGCC ATGATGGATG TGATCGGTGC CCAGGACACC ATCAACCAGG TCTACCATTT GCGCCGTTCG GTGGATGATT TTGAGGCGGC GCTGGAGGCA TTGGTGGCCA CCAGGATGAA AGTGGTGCCG CATATCGTCA TCGGGCTGCA TTACGGTGAA TTGCTCGGTG AGTGGAACGC TCTTGAAATT ATCCAGCGGC ATCTGCCCAG TGCCCTGGTG CTGGTGGTGA TCATGCCGCA GTATGCCGCT TCGAGCCGGC CTTTCGCGAC GCCAGCGGCG GATGAAATTG GTAAATTCTT TATGGATGCG CGGGCTGCGC TGCCGGAAAC ACCGGTATTG CTGGGCTGCG CACGGCCTTC CGGGGTGCAT CGTTCCATCA CCGATACCTA TGCGGTCATG GCGGGACTGA ACGGGGTGGC CTTCCCCTCT GATGGCATGC TGGCCCTCGC CAAGCACCTG GAACGGGATG TCTTTGTGAC ACCGTCCTGC TGCTCCATGA TTGTCGGTGA AGAAGTCCTG GCGCTCGGTG ACGAGACGAC CACTGTGCCT CTGGATTATG TCCCCGCCGC GCCGAAACGT CGCCCACAAC TGCGGGATAT CCCGATTGTG TTTACGGCCT GA
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Protein sequence | MNPWLNAVAQ VEALEDLVLN ADLVDSMRER WSGLSGSQVG RINFYTPSFK HHETSEVSAC GKNAFPAISI TGGDCKLQCD HCKAKILEPM IPVRTPEELD RLVDRIVLDG GRGLLLSGGS DHQNVVHYEP YFPTVRKIKD RYPNLQIAMH TGIATPEFAR GMEDAGVDVA MMDVIGAQDT INQVYHLRRS VDDFEAALEA LVATRMKVVP HIVIGLHYGE LLGEWNALEI IQRHLPSALV LVVIMPQYAA SSRPFATPAA DEIGKFFMDA RAALPETPVL LGCARPSGVH RSITDTYAVM AGLNGVAFPS DGMLALAKHL ERDVFVTPSC CSMIVGEEVL ALGDETTTVP LDYVPAAPKR RPQLRDIPIV FTA
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