Gene Lferr_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2107 
Symbol 
ID6878098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2101066 
End bp2102709 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content65% 
IMG OID642789970 
Productputative mercuric reductase 
Protein accessionYP_002220522 
Protein GI198284201 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
[COG2608] Copper chaperone 
TIGRFAM ID[TIGR02053] mercuric reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA ACGCGCCCAC CGAACTCGCT ATCACTGGCA TGACCTGCGA CGGTTGCGCC 
GCGCATGTGC GCAAAGCACT CGAAGGCGTG CCCGGCGTAC GCGAGGCGCA GGTGTCCTAC
CCGGATGCCA CGGCCCGGGT CGTGCTGGAG GGCGAGGTGC CGATGCAGCG GCTAATCAAG
GCGGTGGTTG CAAGTGGCTA TGGTGTGCAT CCACGGAGCG ACGGTGCCTC CTCCACAAAC
GATGGACAGG AGCTACACAT CGCTGTGATC GGCAGCGGCG GAGCGGCGAT GGCGTGCGCA
TTGAAGGCTG TCGAGCGGGG CGCGCGCGTG ACGCTGATCG AACGCAGCAC CATCGGCGGC
ACCTGCGTGA ACATCGGTTG CGTGCCGTCC AAGATCATGA TCCGCGCCGC CCATATCGCC
CACCTGCGCC GGGAAAGCCC ATTCGATGGC GGCATCCAGG CGGTCGCGCC GACCATCCAG
CGCACAGCGC TGCTGGTCCA ACAGCAGGCC CGTGTCGATG AACTGCGTCA CGCCAAGTAC
GAAGGCATCC TGGACGGCAA CCCGGCCATC ACCGTTCTGC GCGGTGAAGC GCGTTTCAAG
GACAGCCGGA GTGTTGTCGT CCATTTGAAC GATGGTGGCG AGCGCGTCGT AATGTTCGAC
CGCTGCCTGG TTGCCACGGG CGCCAGTCCG GCCGTGCCGC CGATTCCCGG CTTGAAAGAC
ACTCCTTATT GGACCTCCAC CGAAGGGCTG GTCAGCGAAT CGATCCCCGA GCGTCTGGCC
GTGATCGGCT CGTCGGTGGT GGCGCTGGAA CTGGCGCAAG CCTTCGCCCG GCTCGGCAGC
CATGTGACGA TCCTGGCGCG CGGCACCTTG TTCCTCCGGG AAGACCCGGC CATCGGTGAG
GCCATCACGG CGGCGTTTCG CGCCGAAGGC ATCGAGGTGC TGGAGCACAC CCAGGCCAGC
CAGGTCGCTT ATGCGGATGG CGAATTTGTG CTAGCCACCG GGCACGGCGA ACTGCGCGCC
GATAAGCTGC TGGTCGCCAC TGGTCGCGCA CCGAACACAC GCCGCCTGAA TCTGGAAGCG
GCGGGCGTGG CCATCAATGC GCAAGGGGCC ATCGTCATCG ACCAGGGTAT GCGCACGAAC
AGCCCGAACA TTTACGCCGC TGGCGACTGC ACCGACCAGC CGCAATTCGT CTACGTGGCG
GCAGCGGCCG GCACCCGTGC GGCCATCAAC ATGATGGGCG GTAGTGCAGC CCTGGACTTG
ACGGCGATGC CAGCCGTGGT GTTCACCGAT CCGCAAGTGG CGACTGTGGG TTACAGCGGC
GCGGAAGCGC ATCGCGACGG CATCGAAACC GACAGCCGCA CGCTGACGCT CGACAACGTG
CCGCGGGCGC TCGCCAATTT CAATACACGC GGCTTCATCA AGCTGGTAGC CGAAGTGGGC
AGTGGTCGCC TAATCGGCGT GCAGGTGGTC GCCCCGGAAG CGGGCGAGCT GATCCAGACT
GCCGCGCTGG CGATTCGTAA CCGGATGACG GTACAGGAAC TGGCTGACCA GTTGTTTCCC
TACCTGACGA TGGTCGAAGG GCTGAAGCTT GCTGCCCAGA CCTTCACCAG GGATGTGAAG
CAGTTGTCCT GCTGTGCGGG TTGA
 
Protein sequence
MTENAPTELA ITGMTCDGCA AHVRKALEGV PGVREAQVSY PDATARVVLE GEVPMQRLIK 
AVVASGYGVH PRSDGASSTN DGQELHIAVI GSGGAAMACA LKAVERGARV TLIERSTIGG
TCVNIGCVPS KIMIRAAHIA HLRRESPFDG GIQAVAPTIQ RTALLVQQQA RVDELRHAKY
EGILDGNPAI TVLRGEARFK DSRSVVVHLN DGGERVVMFD RCLVATGASP AVPPIPGLKD
TPYWTSTEGL VSESIPERLA VIGSSVVALE LAQAFARLGS HVTILARGTL FLREDPAIGE
AITAAFRAEG IEVLEHTQAS QVAYADGEFV LATGHGELRA DKLLVATGRA PNTRRLNLEA
AGVAINAQGA IVIDQGMRTN SPNIYAAGDC TDQPQFVYVA AAAGTRAAIN MMGGSAALDL
TAMPAVVFTD PQVATVGYSG AEAHRDGIET DSRTLTLDNV PRALANFNTR GFIKLVAEVG
SGRLIGVQVV APEAGELIQT AALAIRNRMT VQELADQLFP YLTMVEGLKL AAQTFTRDVK
QLSCCAG