| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1233 |
|---|
| Symbol | |
|---|
| ID | 6877206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1199761 |
|---|
| End bp | 1200177 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642789110 |
|---|
| Product | nitrogen fixation protein NifX |
|---|
| Protein accession | YP_002219678 |
|---|
| Protein GI | 198283357 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02663] nitrogen fixation protein NifX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000802968 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCG CATTTTCAAC CCAGGATATG CAGAGAGTCG ATGCTCATTT TGGTTGGGCG
AAAAATATCG CAATTTATGA GATCAGTGCA GAAGAATACC ATTTTCTGGA GGCTGTGCAA
TTTGACGGCG AACTTGCCGA GGATGGCAAC GAAGACAAGT TGGCTCCCAA GCTGGAAGCT
ATCAAGGATT GCGCCATTTT ATATGTGGCA GCCATCGGCG GCTCCGGTGC AGCGCGGGTG
GTGGCCATGA AAATTCATCC CATCAAGGTG AATGAACCGG AACCCATCCA TGGAATACTC
GACAAGCTGC AGGTCGTATT ACAGGGAACT CCCCCCCCCT GGCTCCGCAA GGTCATGAAC
AAGGGTGCAG AAAAAGCGTT TAATTTTTAT GACGAAGAGG AATTAAGTCA TGCCTGA
|
|---|
| Protein sequence | MKVAFSTQDM QRVDAHFGWA KNIAIYEISA EEYHFLEAVQ FDGELAEDGN EDKLAPKLEA
IKDCAILYVA AIGGSGAARV VAMKIHPIKV NEPEPIHGIL DKLQVVLQGT PPPWLRKVMN
KGAEKAFNFY DEEELSHA
|
|---|
| |