Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0717 |
Symbol | gmk |
ID | 6876679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 677979 |
End bp | 678617 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642788597 |
Product | guanylate kinase |
Protein accession | YP_002219175 |
Protein GI | 198282854 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0194] Guanylate kinase |
TIGRFAM ID | [TIGR03263] guanylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000116826 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGGGGG GAGCGGAACG CGGTATCCTG TGGATTATTT CGGCACCCAG CGGTGCGGGA AAGACCAGTC TGGCCCGGGC GCTGGTGGCG GCGACCCCGC AATTGCGCAG CTCCGTCTCT TACACCACAC GGCCCCCGCG ACCGGGCGAG GCAGAGGGAG CGGACTATCA CTTCGTTTCC ATGGAGGCCT TCACGGCCAT GGCGGAGCGG GGCGAGTTTC TGGAGTATGC CCGGGTGCAT GGCAATGGTT ATGGCACTAG TGAACCTTGG GTGAAGAGTC AGCTGTTCGC CGGGACCGAC TGCCTGCTGG AGATCGACTG GCAAGGTGCG CGGCAGGTGC GGGAAAGACT GCCGGGGCAG GCGGTCAGTA TTTTTATCCT GCCGCCGTCT GTCGCCGCTT TGGCGGAACG TCTGCGTGGC CGTGGCCAGG ATTCGGAGAC GGTCATTGCG CGCAGGCTGG CGGCAGCACG TGAAGAGCTG TTGCATTATG ATGAGTTTGA TTATCTGGTG GTGAATGACC ATTTCCAGGA TGCGTTAGCC GACTTGCAAA GCATTGTCCA TGCGGAACAT CTGCGGCTGG GTTATCAGCA GCATGCCCAG CATCAACGAT TGAAGAATCT CCTCGGTATT AACAGTTAA
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Protein sequence | MTGGAERGIL WIISAPSGAG KTSLARALVA ATPQLRSSVS YTTRPPRPGE AEGADYHFVS MEAFTAMAER GEFLEYARVH GNGYGTSEPW VKSQLFAGTD CLLEIDWQGA RQVRERLPGQ AVSIFILPPS VAALAERLRG RGQDSETVIA RRLAAAREEL LHYDEFDYLV VNDHFQDALA DLQSIVHAEH LRLGYQQHAQ HQRLKNLLGI NS
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