Gene Gbem_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3649 
SymbollspA 
ID6780513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp4176045 
End bp4176539 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content57% 
IMG OID642769644 
Productlipoprotein signal peptidase 
Protein accessionYP_002140437 
Protein GI197120010 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0184315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAA AGTACATCAT ACTGCTGGCG GTCTCCGTGC TGGTGCTGGT CCTGGACCAG 
GTGACCAAGG TCTACATCGA CAAGACCATG CGGTTGCACG ACTCCATCAC CGTTATCGAG 
GGGTTCTTCA ACATCACCTA CCTGCGCAAC AAGGGGGCGG CTTTCGGCAT CCTGGCGAAC 
TCCTCCTGGC GGCTCCCCTT CTTCCTGCTG GTCTCCGCCG TGGCGGTCGT GGTCATTCTC 
GTGGTAGTAA GCCGACTGCG GGATGACCAG AAGGTAAGTG CCCTCTCCCT CTCGCTGATA 
TTCTCAGGAG CGTTAGGCAA CCTGATCGAC AGGGTGAGGC TCGGCGAGGT GATCGACTTT 
CTCTACGTCC ACTGGTACGA GCATTACTGG CCCGCCTTCA ACGTAGCCGA CTCAGCCATC 
TGCGTAGGCG TCTTCCTTCT CGCCATAGAG ATGGTGCTGG AAGAGAGAAG GGAAAAGGCG 
CAGAAGCAGC AGTAA
 
Protein sequence
MKAKYIILLA VSVLVLVLDQ VTKVYIDKTM RLHDSITVIE GFFNITYLRN KGAAFGILAN 
SSWRLPFFLL VSAVAVVVIL VVVSRLRDDQ KVSALSLSLI FSGALGNLID RVRLGEVIDF 
LYVHWYEHYW PAFNVADSAI CVGVFLLAIE MVLEERREKA QKQQ