Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3272 |
Symbol | |
ID | 6780130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3763154 |
End bp | 3764284 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642769265 |
Product | ABC-2 type transporter |
Protein accession | YP_002140065 |
Protein GI | 197119638 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCGAAC GGCTGAAAGC TATGCTGGTC AAGGAATTCA TCCAGGTGCT GCGCGACCCG CGCATGCGCT TCGTGATGTT CGTGATCCCG GTGGTGCAGA CGCTCATCTT CGGCTACGCG GTGAATACCG ACGTGCGCGA GGTGGCGACC GCCGTCTACG ACCTGGACAA CAGCAGCCAG AGCCGGGAAA TAGCCGACCT CTTCGTCAAG TCGGGTTACT TCCGGCTTGA GGCACGGGTC TACGACGACA AGGCGGCCCA GGAGCTGATC GACAGGGGCG AGGTGAAGGC TGTGCTTAGG ATGAACCGCG GCCTCGGAGA GCGGCTCGTC GGGGGGAGGG GGGCGCAACT GCAGATGATC CTGGACGGAA CCGACTCCAA CACCGCCGGC ATCGCGCTCA ACTACGCCTC CAGGATCGTG GGGGGGTACA ACCAGCGCCT GCAGCAGGAT TGGGGCGCGC GGCACGGCGG AGTGCAGGCT TTTCCTGGGG GAGTGGACCT CGTGAGCCGC GCCTGGTTCA ACGAGAACCT GGAAAGCCGC AACTACTACG TCCCCGCGGT CATCACCAAC ATCGTCTTCA TCATCACCAT GCTCCTCTCC AGCATGGCCG TGGTGCGCGA GAAGGAGATC GGGACCATCG AGCAAGTGAT CGTGACCCCG ATAGGGAAGG GGGAATTCAT CCTGGGAAAG ACCATCCCCT TCGTCCTCAT CGGCTTCATC AACGTGACGC TCATCTCGCT GGTCGCGGTG TTCTGGTTCG ACGTGCCGCT GCGCGGCTCC ATACCGCTTC TCTACTTAGC CACCGCCCTC TTCCTGATGA GCTCGCTGGG CATCGGGCTT CTCATCTCCA CCATCAGCCG TACCCAGCAG CAGGCGATGA TGAGCGCCTT CTTCGTCATC TTCCCCGCCA TCCTCCTCTC CGGGTTTGCC TTTCCCATCG AGAGCATGCC TCAAATCGTG CAGTGGTTCA CCCTGGTGAA CCCCATGCGC TTTTTCCTGG TCATCATCCG CGCCATCTTC CAGAAGGGGG TCGGCGTCGA CATCCTCTGG CCGCAGATGG CGGCCTTGCT TCTGATCGGC GTCACCATTC TCTCCAGCGC CGTCCTCAGG TTCAAGAAGA CGCTGGGGTA G
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Protein sequence | MIERLKAMLV KEFIQVLRDP RMRFVMFVIP VVQTLIFGYA VNTDVREVAT AVYDLDNSSQ SREIADLFVK SGYFRLEARV YDDKAAQELI DRGEVKAVLR MNRGLGERLV GGRGAQLQMI LDGTDSNTAG IALNYASRIV GGYNQRLQQD WGARHGGVQA FPGGVDLVSR AWFNENLESR NYYVPAVITN IVFIITMLLS SMAVVREKEI GTIEQVIVTP IGKGEFILGK TIPFVLIGFI NVTLISLVAV FWFDVPLRGS IPLLYLATAL FLMSSLGIGL LISTISRTQQ QAMMSAFFVI FPAILLSGFA FPIESMPQIV QWFTLVNPMR FFLVIIRAIF QKGVGVDILW PQMAALLLIG VTILSSAVLR FKKTLG
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