Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2795 |
Symbol | aspA |
ID | 6782794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3222525 |
End bp | 3223925 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642768789 |
Product | aspartate ammonia-lyase |
Protein accession | YP_002139595 |
Protein GI | 197119168 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1027] Aspartate ammonia-lyase |
TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000791072 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACAC GACTCGAAAA AGACACTATG GGTGTGGTTG AGGTACCGGA GGGGGCCTAT TACGGGGCTC AGACCCAGAG GGCCGTCGCC AACTTCCCCA TTTCAGGACT AAAACCGCAC CATGCCCTGG TCCGATCCAC GGTGAGGATA AAGAAGTGCG CCGCGCAGGC GAACATGACG ACCGGCAGGC TCGACGCCGA GGTGGGAGGC GCCATCGTGA AGGCGGCCGA TGAGGTTCTG TCCGGAGCGC TCGCCGACCA GTTCGTGGTG GACCCGTTCC AGGCCGGCGC GGGGACCTCG CACAACATGA ACGTCAACGA GGTGTTGGCC AACCGCGCGG CGGAACTGTT GGGCGGCAAG CAGGGCGACT ATTCGCGAGT CAATCCCAAC GACCATGTCA ACATGGCCCA GTCCACCAAC GACGTCTTCC CGACCGCGAT GCGGCTCGCC GCGCTGGAAT TGGCAGAGCA GACGATGACG GAGCTGGCGG GCCTTTCCGC AGCCTTCGAA CAAAAGGGTA AGGAGTTCGA CGGGATACTG AAGTCCGGGC GGACCCACCT GCAGGACGCA GTCCCCATCC GTCTGGGGCA AGAGTTCGCC GCCTACGGCA AGGCCATCGG GAACAATCGC GCCGGCATCG AGCGGGCGCT TCCCGCCCTG AGGGAGCTGG GCATCGGCGG GACTGCCGTC GGCACGGGGC TCAATGCGGA AGAGGCCTTC ATCGACCTGA TAGTGCAGGG GCTCGCCCGC GAAACCGGAC AGGAAGTCAA TCGTGGGGGA AACCTGGTCG AGCGGATGCA GAACATGGAT CCCTTCGTGG CGCTCAGTTC CACCCTCAAG GGGACAGCTC TCAACCTGAT CCGGATCGCC AACGACTTGA GGCTTCTCTC CTCGGGGCCC AGGACCGGTT TGGGCGAGAT CAACCTCCCC GCGATGCAGC CCGGCTCCTC CATCATGCCG GGGAAGGTGA ATCCGGTCAT GCCGGAGGTG ACCACCATGG TCTGCTTCCA GGTGGTCGGC GCGGATCTTA CCGTCGCCAT GGCGGCGCAG GCCGGGCAGT TGGAGCTGAA CGTCATGATG CCGGTCATCG CCTTCAACAC GCTCTTCTCC CTGGAGATAC TGAAGAACGT GGTGCATCAG TTCACCACCT TGTGCGTCGC CGGCATCAGC GCCAACGAGG AGCACTGCCG CAACTACCTG GACCAGTCGG TCGGGCTTGC CACCGTGCTC GCGCCGAGCA TCGGCTACGC CGCGGCGGCA GAGGTCGCCA AGGAGTCGGC CCGGACCGGG AAGAGCATTA GGCAGGTGAT ACTGGAAAGC GGCATACTGA CCGAGGCGGA ACTGGACCAG GTGCTGGCCC CCTTCCCGCT CACTACTCCG GGCGTGCATG GCAAGGGTTG A
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Protein sequence | MATRLEKDTM GVVEVPEGAY YGAQTQRAVA NFPISGLKPH HALVRSTVRI KKCAAQANMT TGRLDAEVGG AIVKAADEVL SGALADQFVV DPFQAGAGTS HNMNVNEVLA NRAAELLGGK QGDYSRVNPN DHVNMAQSTN DVFPTAMRLA ALELAEQTMT ELAGLSAAFE QKGKEFDGIL KSGRTHLQDA VPIRLGQEFA AYGKAIGNNR AGIERALPAL RELGIGGTAV GTGLNAEEAF IDLIVQGLAR ETGQEVNRGG NLVERMQNMD PFVALSSTLK GTALNLIRIA NDLRLLSSGP RTGLGEINLP AMQPGSSIMP GKVNPVMPEV TTMVCFQVVG ADLTVAMAAQ AGQLELNVMM PVIAFNTLFS LEILKNVVHQ FTTLCVAGIS ANEEHCRNYL DQSVGLATVL APSIGYAAAA EVAKESARTG KSIRQVILES GILTEAELDQ VLAPFPLTTP GVHGKG
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