| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2768 |
|---|
| Symbol | |
|---|
| ID | 6782766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3195422 |
|---|
| End bp | 3196372 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642768761 |
|---|
| Product | ribose-phosphate pyrophosphokinase |
|---|
| Protein accession | YP_002139568 |
|---|
| Protein GI | 197119141 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
|---|
| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0630543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA AGATCAGGGT GTTCAGCGGT AACTCCAATC CTATTCTGGC AGAAAAGATC
TGTGATTGCC TGAAGGTGCC CCTGGGGAAG GCAAAGGTCA AGACCTTCTC CGACGGCGAG
ATCATGGTCG AGATCGGCGA GAACGTCCGC GGGCGTGACA TCTACGTGGT GCAGTCGACC
TGCTGTCCGA CCAACAACAA TCTGATGGAA CTGCTGATCA TGATCGACGC CCTGAAGAGG
GCTTCGGCGG CTACCATCAC CGCCGTTATC CCCTACTACG GCTATGCGCG CCAGGACCGC
AAGGCCGCAC CGAGGACCCC GATCACTTCC AAGCTCGTGG CCGACCTGAT CACTACTGCC
GGCGCCGCCA GGGTGGTGAC CGTGGACCTT CACGCGGGGC AGATCCAGGG CTTTTTCAAT
ATCCCTGTGG ACAACCTCTA CGCCGCTCCG GTTTTGCTCG CCCACCTGAA GAGCCGCTTC
GCCGACGATC CGGACAACCT GGTCATGGTG TCGCCGGACG CAGGCGGGAC CGAACGCGCC
AGGGCCTTCG CCAAGAGGCT CGGCTGCACG CTGGCCGTCA TCGACAAGCG CCGTACCGGC
CCGAACGTGG CCGAGATCAT GCACCTGATC GGCGACGTGA AAGGTAAAAA CGCCATCATC
CTGGACGACA TGATCGACAC GGCAGGGACC TTGACCCAGG CAGCTCTCGC TCTGAAACAG
CACGGCGCCG CCAACGTCTA CGCCTGCGCC ACACATGGCG TGCTTTCCGG CCCCGCGATC
GACAGGATCA ACGCCTCGGT CATCGAGAAA GTCGTCATCA CCGATACGGT TCCCCTGGGC
GAGAAAGCGG AGCTTTCGGA CAAGATCAGG GTGCTTTCCG TTGCAGAACT TTTGGGAGAA
GCGATCCGCC GCATCCATGA GGATGAATCG GTCAGCTCGC TTTTCGTGTA A
|
|---|
| Protein sequence | MENKIRVFSG NSNPILAEKI CDCLKVPLGK AKVKTFSDGE IMVEIGENVR GRDIYVVQST
CCPTNNNLME LLIMIDALKR ASAATITAVI PYYGYARQDR KAAPRTPITS KLVADLITTA
GAARVVTVDL HAGQIQGFFN IPVDNLYAAP VLLAHLKSRF ADDPDNLVMV SPDAGGTERA
RAFAKRLGCT LAVIDKRRTG PNVAEIMHLI GDVKGKNAII LDDMIDTAGT LTQAALALKQ
HGAANVYACA THGVLSGPAI DRINASVIEK VVITDTVPLG EKAELSDKIR VLSVAELLGE
AIRRIHEDES VSSLFV
|
|---|
| |