Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2627 |
Symbol | |
ID | 6782624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3042640 |
End bp | 3043893 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642768622 |
Product | phosphate-selective porin O and P |
Protein accession | YP_002139431 |
Protein GI | 197119004 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3746] Phosphate-selective porin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00186911 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAGAA AATATGTGCT GGTTGCAGCA GTGGTTACCA CGCTGGCGGG GCAGGAGGTC GGAGCGAGAA CTCTGGAGGA CGTTCTGAAA GAAAAGGGGG TTATCACAGA GCAGGATTAC AAGGAGGTAA CCAAAAGCAA GGCTCAGAGC TACAAAATTG GCAAAGGATT CACACTTACA TCCTCCGAAG AAAAGTTCCA GATGTCGCTC GGCGGCAGAC TCCAAACTCG CTACACCTAT ACCGATGGCG AAGACAGTTC CCTTACTCCC AACGCGAGCC GGTGGGAGGT CAGGAGGATG AAGTTATGGA TAAATGGCTA CGCCTACAAC AAGGATCTTA CCTACCTGCT CCAGGTTGAT TTCGTCTCGG GAGGCTCCTC AAGGCTCCTC GAGCACGCCT ACCTCAACTA TCGCTTCATC GATGAGGTTC AGCTTCTGGC AGGACAGACC AAGGTTCCGT TCGGGAGGCA GTGGCTCAAC TCCTCGGGCA GCCAGCAATT TGTCGACCGC TCCATTACGT CCGACACCTT CCGTCCGGGT TACGATGCTG GCGCAAAATT GGGCGGTGAT CTCTTCGGTG GGATCAGCAC CTATGAGATA GGTGCCTATG GCGGCGCCGG GCAGAGCGCG ACCCGTGCAA CGAACGGAGA TAACACCGCC ACAGCCATCG CTGCCCGCGT GACCGTCAAT CCCTTCGGCA AGATGCCCTA CTCGGAAAGC GACCTTGATG ACACAGCGAC GCCGCTCCTC TCCATCGGTG CCAACTACTA CGGCAACACC CTCCGTAAGA CTGCTGCAAC CACCTTTGAA ACCAACAACA TCACTTTAGC GGGAACAAAT GGTTGGCTCG GCAGGAACGT TGCGGCGTTT GCGACGGGCG AACTGGTTGA TATCGACAGC TACGGCGCCG ATGCCGCATT CAAATGGCGG GGTGTTTTCG CATTGACTGA GTATTTGTAC GGGCGCGGGA AAGGCGGCGA CAGCGGCAGC ATTGTCCGTG CGCACGGGTG GTATGCACAG GCAGGTTATT GCATAGTTCC CCAGACGCTT GAGGTGGCTT TGCGTTACGC TTTCATCGAC CCGAACCGCG CCGTCTCAGA TGACCAGCGC ACAGACGTGT CGGCAGCGGT TTCCTATTAT TTTAACAAGC ACAACCTGAA GATTCAGGGA GATGTCACCA ACGCTCACGA CCAGAGCAAG GGTAGCGGTG TTGATGACCA GATTTACCGG CTACAGGCCC AGATAATTTT CTAA
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Protein sequence | MRRKYVLVAA VVTTLAGQEV GARTLEDVLK EKGVITEQDY KEVTKSKAQS YKIGKGFTLT SSEEKFQMSL GGRLQTRYTY TDGEDSSLTP NASRWEVRRM KLWINGYAYN KDLTYLLQVD FVSGGSSRLL EHAYLNYRFI DEVQLLAGQT KVPFGRQWLN SSGSQQFVDR SITSDTFRPG YDAGAKLGGD LFGGISTYEI GAYGGAGQSA TRATNGDNTA TAIAARVTVN PFGKMPYSES DLDDTATPLL SIGANYYGNT LRKTAATTFE TNNITLAGTN GWLGRNVAAF ATGELVDIDS YGADAAFKWR GVFALTEYLY GRGKGGDSGS IVRAHGWYAQ AGYCIVPQTL EVALRYAFID PNRAVSDDQR TDVSAAVSYY FNKHNLKIQG DVTNAHDQSK GSGVDDQIYR LQAQIIF
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