| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1758 |
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| Symbol | |
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| ID | 6781747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2026113 |
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| End bp | 2026718 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642767751 |
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| Product | transcriptional repressor, LexA family |
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| Protein accession | YP_002138570 |
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| Protein GI | 197118143 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000113097 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACAGC TAACGGCACG ACAGACGGAG GTGCTTCAGA TCATCACCCG GCATCTGGAG
ACGTGCGGCT ACCCCCCTAC CCTGCGTGAG ATTGCTGCGC AGCTTGGCAT TTCGGGGACA
CTGGGAGTAA TGAAGCATCT GGAAGCCCTG GAGAAGAAAG GATACCTGCG CCGGCAGGAG
GGGAGTACCA GGGGGATTAC GCTGTGCAAC CAAAGCCAGG CGGCCAGCCT CCCCATAGTG
GGAGTGGTGC GCGCGGGCCT GCTGCACCCG GCCATACAAG ACATCGAGGG GCACTTCGCC
ATCGACCGCT CTCAACTCGC TTCGGGTGGC GCTTTCTTCT TGCGGGTCAA AGGGGACTCG
ATGGTCCACG CCCATATTGT GGAGGGGGAC CTAGCGCTGG TGCGTCCCCA ACCCCACGCC
TCGAATCGGG ATATCGTGGT GGCCATGGTG GATGGGGAGG CCACGCTGAA AAGGTTCTAC
CGCGAAGCGG ACCGCATCAG ACTACAACCC GAGAACCCGA ACTACGAGCC GATCATAATC
GAGAAGGGGG AGCAGGAGGT GTCTATAGTG GGGAAAGTTG TTGGCATCTA CCGGCAAATG
GAGTAG
|
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| Protein sequence | MEQLTARQTE VLQIITRHLE TCGYPPTLRE IAAQLGISGT LGVMKHLEAL EKKGYLRRQE
GSTRGITLCN QSQAASLPIV GVVRAGLLHP AIQDIEGHFA IDRSQLASGG AFFLRVKGDS
MVHAHIVEGD LALVRPQPHA SNRDIVVAMV DGEATLKRFY READRIRLQP ENPNYEPIII
EKGEQEVSIV GKVVGIYRQM E
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