Gene Gbem_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1000 
Symbol 
ID6780973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1157507 
End bp1158370 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content63% 
IMG OID642766982 
ProductCBS domain containing protein 
Protein accessionYP_002137817 
Protein GI197117390 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0370099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAGAGG ATAACGGAAG CAAGGGGCAG GGCTTGATCG AGTCCCTCAC CAGGCTCTTG 
TACGGCAAGA AGCGGGTCAC CGAGGCCGAG ATCCAGGAGA TGATGGACGC CGGCGAGGAA
GAAGGGGTCA TCAACCAGGA GGAGAACGCG ATGATCCGTT CCATCCTGGG CCTGGGTGAC
TCCATGGTGC GCGAGATCAT GCTGCCGCGC ATGGAGATGT CCTGCGTCTC CATCGAGGAC
GAGGTGAGCG AGGTGCTGAA ATCCATCATC GCCTCCGGCC ATTCCCGCCT CCCTGTCTAC
GAAGGAACCA TCGACAACGT GATCGGCCTC ATCTACGCCA AGGACCTGCT GAGGTACTGG
GGGGAGCCGG ACCACGCGAT TGAGCTTAGA AAGCTGATCC GCCCGCCGTT TTTCATCCCC
GAGACCAAGA ACCTGGAGGA GTTGCTGCAC GACTTCAAGA AGCGGCGGGT GCACATGGCT
GTCGTCATCG ACGAGTACGG CGGCACGGCC GGGCTCGTCA CCATCGAGGA CCTCTTGGAG
CAGATCGTGG GGGACATCCA GGACGAGTAC GACCTGGAGA CCGAGCGGCT GTCGGTGCAA
GCGGACAACT CCATCGTGGC CGACGGCAGG CTCCCCATCG AGGAGCTGCA GGAGCATTTC
GACGTGGTGG TGGAGAAGGA CAAGTTCGAG ACGGTGGGGG GGCTCATTTT CCATCTCACC
GGGCGCATCC CCGCCGCCGG AGAGGTGATC GAGAGCGACG ACCTGGTCTT GACCGTGCTG
GAGGCTGACG ACAGGCGCAT CGCCAAGGTG CATATCGCCA GGCGCGAGGC GCGGCCGCAG
GACAAGGAGT CCGAGGCGCC GTGA
 
Protein sequence
MEEDNGSKGQ GLIESLTRLL YGKKRVTEAE IQEMMDAGEE EGVINQEENA MIRSILGLGD 
SMVREIMLPR MEMSCVSIED EVSEVLKSII ASGHSRLPVY EGTIDNVIGL IYAKDLLRYW
GEPDHAIELR KLIRPPFFIP ETKNLEELLH DFKKRRVHMA VVIDEYGGTA GLVTIEDLLE
QIVGDIQDEY DLETERLSVQ ADNSIVADGR LPIEELQEHF DVVVEKDKFE TVGGLIFHLT
GRIPAAGEVI ESDDLVLTVL EADDRRIAKV HIARREARPQ DKESEAP