| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0938 |
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| Symbol | rplV |
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| ID | 6783780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1100807 |
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| End bp | 1101142 |
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| Gene Length | 336 bp |
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| Protein Length | 111 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642766915 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_002137755 |
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| Protein GI | 197117328 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000140309 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATCAT CGGCTAAATT ATCCTCTGTC CGCCTCTCTC CGAGAAAGAC ACGCCTGGTC
GTGGATCTCG TCAGGGGCAA GGGCATTCAG ACTGCGCTGA ACACTCTGCG TTTCTCACCG
CAACCGTCGG CGAAGCTCAT CTCGAAGCTC CTCTCCTCTG CCGTGGCCAA TGCCGAGCAG
AAGGGTTGCT CCGATGTGGA CAAGCTCTTC GTCAAGACGA TTTTCGTCGA TGGCGGCGCA
GTACTTAAGC GCTTCACCCC CCGCGCCATG GGCCGGGCCA GCAAGATCAG AAAACCGACG
AGCCACATTA CCGTGGTCCT TGCGGAAAAG AAATAA
|
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| Protein sequence | MESSAKLSSV RLSPRKTRLV VDLVRGKGIQ TALNTLRFSP QPSAKLISKL LSSAVANAEQ
KGCSDVDKLF VKTIFVDGGA VLKRFTPRAM GRASKIRKPT SHITVVLAEK K
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