Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0820 |
Symbol | |
ID | 6783658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 971027 |
End bp | 971557 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642766794 |
Product | hypothetical protein |
Protein accession | YP_002137639 |
Protein GI | 197117212 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000126881 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAC ATTCCAGAAC AGCGGCCTGG TTGCTGCTGG CCCTCTTGGG GGTGAGCGGG TGCGCAACTG TTCCCACCGG CCCCAGCGTC AGGGTGCTGC CGGCTCCCGG TAAGTCATTC GAACAGTTCA TGGCCGAGGA TGCGGTCTGC AGGCGCTGGT CCGAGCAGCA ACTGGGCCTG AACCGCCAGG ACACCGTCAA CCAGAACACC GCAACCAGCG CAGTGGTCGG TACTGCCGTA GGTGCCGGGG TCGGGGCGCT GCTGGGCGCA GCCGGCGGCA ACGCGGGGAC CGGAGCGGCT ATAGGAGGAG GCACGGGGCT CCTGTTCGGG GCCGCCAGCG GCTCGGAATC CGGCCGGGCC TACGGTTACG AGGCGCAGCG GCTTTACGAC AACACGTACG TTCAGTGCAT GTACTCGAAG GGAAACCAGA TCCCCGGCTC GGTGCGCAAG GTGCGCCGGG TGAGGACAGT TGCTCCTCCG CCTCCGCCCG ACATGTACTC GGTCCCTCCC GATTACTACC CTGCCCGTTA G
|
Protein sequence | MKKHSRTAAW LLLALLGVSG CATVPTGPSV RVLPAPGKSF EQFMAEDAVC RRWSEQQLGL NRQDTVNQNT ATSAVVGTAV GAGVGALLGA AGGNAGTGAA IGGGTGLLFG AASGSESGRA YGYEAQRLYD NTYVQCMYSK GNQIPGSVRK VRRVRTVAPP PPPDMYSVPP DYYPAR
|
| |