Gene Gbem_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0309 
Symbol 
ID6783135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp382719 
End bp383318 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content55% 
IMG OID642766278 
Producthypothetical protein 
Protein accessionYP_002137136 
Protein GI197116709 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000000916474 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTATAGTTCT TGCAGTTTTG TTGGCTTTGG TTTCCCTCGT TCCCGGCGCT 
GCAATGGCGG ACAGCATCAA GGGGAGGTTG GGCGTGACTG GTAAGGTCGG GTTTATCGTC 
CCGTCCGACA ACGAAGCTGA ATTCGGCTTC GGAACGAACC ACACCGACAC CGGTTTAGTC 
GTGGGCGGCG GTCTTCTTTA CGGCATCGAC GATCACTTCG CCGCCGAGTT GGATGTGACC 
AACTCTTCCT TCGATTCGGA AATCGGCGAC TTCGACGTCA CCGATATCTC CTTCGGCGGC 
CAGTACCGTT TCACCAACAT GCGTGACAGA AGGCTCGTTC CCTACATTGG AGCGGGCTTG 
GACATCATCT CTTCTGACTT CGATTCGGAT TTCGGGGGAA GGCGCCATGT CGACACGACG 
CTGGGTGTGC ATCTGAGCGG AGGTCTCGAT TATTTCGTTG AGAAGCACGT CGCTCTGACC 
GCCGAAGCAA AGGTCGTGCT GGCGCCGGAC GCAGACATCA CTGACGACGG CTTCCACAGC 
GGTTCCTTCG ATCCGACCAA CTTCTCCACC ACCTTCGGAG TCCGGTTCTT TTTCAACTAA
 
Protein sequence
MKKIIVLAVL LALVSLVPGA AMADSIKGRL GVTGKVGFIV PSDNEAEFGF GTNHTDTGLV 
VGGGLLYGID DHFAAELDVT NSSFDSEIGD FDVTDISFGG QYRFTNMRDR RLVPYIGAGL 
DIISSDFDSD FGGRRHVDTT LGVHLSGGLD YFVEKHVALT AEAKVVLAPD ADITDDGFHS 
GSFDPTNFST TFGVRFFFN