| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01736 |
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| Symbol | |
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| ID | 6776177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1864146 |
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| End bp | 1865195 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642755169 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_002126034 |
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| Protein GI | 196156545 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCAC GATTTTCTTT ATCGCCCTTG TTAATTGGTG TGGTTTTGCT TGCTGGTATA
GTGGTGTACT TGAATATGCC AGAAGAGCAG AGTGCGAATA AAGGTGGTCC TAGGGCTACG
CCAGTCAATA CCGCGATGGT TTCCTCTCAG GCATTTCCTA TTACCATCGA ATCGCTAGGC
ACAGCAATTG CCAATGAGTC GGTCAATATC ACTGCTCAAG TTACCGATAC AGTAAAGGCA
CTTCATTTTG AAGATGGCGA TGAAGTGAAA AAAGGAGCGC TGCTGGTTCA GCTTAACAAT
ACCGAGGAGC GCGCTCGAGT CGAAGAGTTA AAAGCAAACA TTGAAGAGGC TAAACGTCAG
TTCACCCGTA TAGCGGACTT GCGCCAGTCT AACGCCACTT CCGAACAATT ACTCGATGAG
CAACAGGCCC GCGTAAAAGC GCTTGAAGCA CAACTAGATA TCGCGCAGGC TCAGCTTAAT
GATTTGCAAA TTCGCGCGCC GTTTAGTGGG CTGTTAGGTA ACCGCGAGAT CAGTGTTGGC
TCACTGGTGC AGCCAGGCAA TACCATCACT TCTTTAGATG ATATTAGCGT AATAAAGGTC
GACTTTAGTG TGTCTGAAAA CCACTTGGCT AGTGTGGCAA AAGGGCAGAC GATCACCGCT
TCGTCGGTAG CCTACCCCGG TGAAAGCTTT TCGGGAAAGA TCACGAATAT CGATACACGA
CTTGACCCTA TTAGCCGCTC TATTCGAGTT AGGGCGGCGC TAGATAACCA AGATAAGCGC
TTGCGCCCTG GCATGTTGTT AACCGTAGTA GTAGAAAAGC GGGTGTTAAA TACCTTGGTA
CTGCCAGAAA AAGCACTGGT ACCCGTTCAA GACAAGCAAT TCGTTTATGT AGTAAAGGAC
GATGTAGCGC ACCAAACCGA AGTCGAAATA GGGGAGCGCC GTCCCGGCCT GGTACAAATA
GTAAGTGGCT TAAGCGCAGG GGACGAAGTG ATAACCGAAG GTACGCTTCG CGTTCGCGAC
CAGTCGCCGG TTAATGTATT AAACCGCTAG
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| Protein sequence | MSSRFSLSPL LIGVVLLAGI VVYLNMPEEQ SANKGGPRAT PVNTAMVSSQ AFPITIESLG
TAIANESVNI TAQVTDTVKA LHFEDGDEVK KGALLVQLNN TEERARVEEL KANIEEAKRQ
FTRIADLRQS NATSEQLLDE QQARVKALEA QLDIAQAQLN DLQIRAPFSG LLGNREISVG
SLVQPGNTIT SLDDISVIKV DFSVSENHLA SVAKGQTITA SSVAYPGESF SGKITNIDTR
LDPISRSIRV RAALDNQDKR LRPGMLLTVV VEKRVLNTLV LPEKALVPVQ DKQFVYVVKD
DVAHQTEVEI GERRPGLVQI VSGLSAGDEV ITEGTLRVRD QSPVNVLNR
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