Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01713 |
Symbol | |
ID | 6775633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1838408 |
End bp | 1839589 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642755146 |
Product | chorismate mutase/prephenate dehydratase |
Protein accession | YP_002126011 |
Protein GI | 196156522 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase [COG1605] Chorismate mutase |
TIGRFAM ID | [TIGR01797] chorismate mutase domain of proteobacterial P-protein, clade 1 [TIGR01806] chorismate mutase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.342812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGACA ATGCACTAGA TACTGTTAGA GAGCGAATTA CCGCACTAGA CAGTGAGTTA CTTACCTTAC TTTCAGAACG CAGAAAGCTA ACTAATGAAG TCGCTGAGAC AAAAATTAGA CATCACATTC CTGTGAGAGA TCAAAAGCGC GAAGAGCAGC TCTTAGTACG ACTGATAAAA GAAGGTCAAG ATATTGGACT AGACCCCCAT TACGTGACTC AAATTTTCCA TGTCATTATT GAAGACTCGG TGTTAAACCA ACAGGCAATG CTTGCTGAAC GCGCAAATCC TGGTAGCACG CTTCCGTTAA ACCGTGTGGC GTTTTTGGGT GACAAAGGCT CGTACTCTTA CCTTGCAACA CAGAAGTACT TCTCACGTCG CCCTGGCGAG CTGTTAGAAA TTGGCTGTCA GAGTTTCGCC GAAATCATTC ATAAAGTGGA AAGCACAGAA GCTGACTATG CGGTACTACC AATTGAAAAT ACGACTTCTG GCAGTATCAA CGAAGTATAC GACCAGCTTC AGCACACCCA ATTAAGTATT ATTGGCGAGC TCACTCACCC CATCCGTCAT ACTCTTTTAG TGGGAAGTGA TACCAGCATA GATAAAATTA AAACGCTGTA CGCCCACCCT CAAGTTTTTA CTCAGTGCAG CCATTTCCTT GCGGAGCTAG GCAATGTAGA AGTAAAAACT ATGGACAGCA CGTCATCTGC CATGTTGACC GTGAGCGAGC TCAAACGGGA CGATGTGGCA GCAATAGGCA GTGAAGCTGG CGGTAACTTA TATGGCTTGA TGGCAATTAA GAGTAATTTA GCTAATCAAA AAGAAAACCA CAGTCGCTTT ATTGTCGTTG CGCGCAACCC TGTTGTGGTA CCACTTCAAG TGCCGGCCAA GACCACCCTT GTGATGTCGA CCATTCAAAA ACCTGGGGCG CTGGTTGAAG CACTGCTAGT GCTAAGAGAA AACAGTATTA ACATGACTAA GCTAGAGTCA CGCCCTATTC CGGGTAACCC ATGGGAAGAA ATGTTTTATA TTGATGTTGA GGGCAACGTA GAGGACGGCC CCGTCCAAAA TGCGCTAGAC TCACTACGTG GCATAACGCG CTACATCAAA GTACTTGGAT GCTACCCAAG TGAAGAAATT AGCCCGACTA AAGTAGCTGC GGCAAGTGCA TTAGCTGACT AG
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Protein sequence | MSDNALDTVR ERITALDSEL LTLLSERRKL TNEVAETKIR HHIPVRDQKR EEQLLVRLIK EGQDIGLDPH YVTQIFHVII EDSVLNQQAM LAERANPGST LPLNRVAFLG DKGSYSYLAT QKYFSRRPGE LLEIGCQSFA EIIHKVESTE ADYAVLPIEN TTSGSINEVY DQLQHTQLSI IGELTHPIRH TLLVGSDTSI DKIKTLYAHP QVFTQCSHFL AELGNVEVKT MDSTSSAMLT VSELKRDDVA AIGSEAGGNL YGLMAIKSNL ANQKENHSRF IVVARNPVVV PLQVPAKTTL VMSTIQKPGA LVEALLVLRE NSINMTKLES RPIPGNPWEE MFYIDVEGNV EDGPVQNALD SLRGITRYIK VLGCYPSEEI SPTKVAAASA LAD
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