Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01502 |
Symbol | |
ID | 6779113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1612338 |
End bp | 1612850 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642754938 |
Product | minor curlin subunit CsgB, putative |
Protein accession | YP_002125805 |
Protein GI | 196156316 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAGA AGTTAAAGGT TAAAAAATAC CAATTCGCTA CATACGTAGG AGCAATAAAA GCCACAGCGT TTTTAGCGTT AACGGTATGT GGTCTTCTAA CCGTCAATTC TCCTGTCTAT GCCCAACAGT CCGATTTATC AACAAGCTCC GACATGGTGG AATCTTCTCT TTCAATGAGT CTGAATGCCC AAGCTATTAC GATAGATGAT GAAACGGTCT TCATCTCTGT CAGCCAGTTT GGGTTAAATA ACATAACTAA CATCATTCAA AGCGGTAACG GCGCAAACCT ATCAAATGTT GTTCAAAATG GCAGTAATAA TGAAGCGATC ATCACCCAAC TTGGTGAGGG AAATGTCGTG AATCTATTGC AGCAAAACAA CAACAATTAC TTCGAGATTA TCCAAGATGG GTTTGACAAT GTAGCCAATG TTAATCAACT GGGTGAGCAG TCTTTTACTG TTTATCAGAT AGGGAACGAA ATGGTAATTA ACATCACGCA ATACAAAGAA TGA
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Protein sequence | MDKKLKVKKY QFATYVGAIK ATAFLALTVC GLLTVNSPVY AQQSDLSTSS DMVESSLSMS LNAQAITIDD ETVFISVSQF GLNNITNIIQ SGNGANLSNV VQNGSNNEAI ITQLGEGNVV NLLQQNNNNY FEIIQDGFDN VANVNQLGEQ SFTVYQIGNE MVINITQYKE
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