Gene MADE_00947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00947 
Symbol 
ID6775275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp996118 
End bp996831 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content44% 
IMG OID642754379 
ProductSignal transduction histidine kinase 
Protein accessionYP_002125255 
Protein GI196155766 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000206574 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATT CAGGCATTGG CATTAGCGAG CAGCAGCAAA AAATTATCTT TTCCCCCTTT 
ATGCAAGCTG AAAACTCTAT GCAAAGACGC TACGGCGGTA CAGGCTTGGG GCTTACTATC
GTTAAGCAGA TTGTTGAGCA TTACGGCGGA AAAATAGAGG TGTCGAGTAA TATTGGCATT
GGTGCGCGGT TTACAGTGAC ATTAACGCTT GATGACGCGA ACGCAGGTGC TATTGCTGAA
AAAGCATGTG GGCATGATTA CTCGTATACG CCTACACGAC AAGAATTAAG CACGTTAAAA
GCCCTAGTTG TGGAAGATAA CGAAATCAAT CAGCTCGTGA TTAAAGAGCA GCTTAGGGAA
GTGGGGCTGC CCAGTGAGGT CGCAGTTAAT GGTGTAGAGG CCGTGGATAA AGTAAAACAT
TCACTGGCCG AGAAAACGCC CTACGCAATG ATTTTTATGG ACTGCCATAT GCCGGTGATG
GGCGGGCTAG AAGCGACACA AAAAATTCGT GCCTTGGGTA AACAAACTAA AGACGTGCCG
ATAATTGCTT TAACCGCAAA TGTATTAACC GGCGATAAAG AAAAATGCTT GAAAAGTGGT
ATGAATGACT TCATACCTAA GCCTGTTGGT GTAAGTCGGT TGAAAGAGTG CGTTTTCAGG
CATTTGAGTA AGCAATTACA AGGTCGTACA ACCGTATTAA AAGATCCTGC TTGA
 
Protein sequence
MTDSGIGISE QQQKIIFSPF MQAENSMQRR YGGTGLGLTI VKQIVEHYGG KIEVSSNIGI 
GARFTVTLTL DDANAGAIAE KACGHDYSYT PTRQELSTLK ALVVEDNEIN QLVIKEQLRE
VGLPSEVAVN GVEAVDKVKH SLAEKTPYAM IFMDCHMPVM GGLEATQKIR ALGKQTKDVP
IIALTANVLT GDKEKCLKSG MNDFIPKPVG VSRLKECVFR HLSKQLQGRT TVLKDPA