Gene MADE_00289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00289 
Symbol 
ID6776111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp315125 
End bp315883 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content45% 
IMG OID642753718 
Productputative transmembrane protein 
Protein accessionYP_002124601 
Protein GI196155112 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAGAA AAAACACATC TTTTGCTGAC CTTCTTTTCC AAGCGCCATG GTGGGTTTCA 
GTTACAACAT CGGCAATTAC CTATTTATTG ATGGGCCATT TGCTGCCTTC TATCGAGACG
AATAATCAGC TAATCAATAT GGTATTTAAG GCGCTCGCAG TTCCTGCGCC TTACTTTGCA
ATTTTCATAT TACTCATTGC TCCATTTTCA TTTTTTAATG CTCGACGCAA GGCCAAGCAA
TTAGATGCTC AAAAGAGTAT TGAAACTATA CGTCAGCTGC ACTGGCGCAA CTTCGAAGAA
CTAGTGGCAG AAGCCTATCG TAGACAAGGG TATCGAGTAA CCGAAGGTGG GTTTGGTGCT
GACGGTGGAA TTGACCTAGA GCTTAGGAAA GGCGATGAAC GAGTCATCGT TCAGTGCAAA
CAATGGAAGG CACAAAAAGT TGGTGTCAGC GTGGTACGTG AGATGTTTGG CGTGCTCACC
GCTAGCAATG CAAACAAGGT TATTATTATT TGTTCGGGTA AATTCACCCA GCAAGCTATA
GATTTCGCCT CTGATAAGCC CGTTGTACTC ATTGACGGAG ACGAGCTGCT TTCACTTATC
CATGATGTGC AAACGGAGCC AAAGGTAGAG GAGATAAAAA AGACCACTTG CCCTAGGTGC
GGAAGTGATC TTGTTGAACG GCAAGCAAAG CGTGGAGCCC ATGCAGGCAA TACCTTTCTA
GGTTGTTCTG CCTTTCCTAA ATGTCGTTAC ACAGAATAA
 
Protein sequence
MPRKNTSFAD LLFQAPWWVS VTTSAITYLL MGHLLPSIET NNQLINMVFK ALAVPAPYFA 
IFILLIAPFS FFNARRKAKQ LDAQKSIETI RQLHWRNFEE LVAEAYRRQG YRVTEGGFGA
DGGIDLELRK GDERVIVQCK QWKAQKVGVS VVREMFGVLT ASNANKVIII CSGKFTQQAI
DFASDKPVVL IDGDELLSLI HDVQTEPKVE EIKKTTCPRC GSDLVERQAK RGAHAGNTFL
GCSAFPKCRY TE