Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00289 |
Symbol | |
ID | 6776111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 315125 |
End bp | 315883 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642753718 |
Product | putative transmembrane protein |
Protein accession | YP_002124601 |
Protein GI | 196155112 |
COG category | [V] Defense mechanisms |
COG ID | [COG1715] Restriction endonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTAGAA AAAACACATC TTTTGCTGAC CTTCTTTTCC AAGCGCCATG GTGGGTTTCA GTTACAACAT CGGCAATTAC CTATTTATTG ATGGGCCATT TGCTGCCTTC TATCGAGACG AATAATCAGC TAATCAATAT GGTATTTAAG GCGCTCGCAG TTCCTGCGCC TTACTTTGCA ATTTTCATAT TACTCATTGC TCCATTTTCA TTTTTTAATG CTCGACGCAA GGCCAAGCAA TTAGATGCTC AAAAGAGTAT TGAAACTATA CGTCAGCTGC ACTGGCGCAA CTTCGAAGAA CTAGTGGCAG AAGCCTATCG TAGACAAGGG TATCGAGTAA CCGAAGGTGG GTTTGGTGCT GACGGTGGAA TTGACCTAGA GCTTAGGAAA GGCGATGAAC GAGTCATCGT TCAGTGCAAA CAATGGAAGG CACAAAAAGT TGGTGTCAGC GTGGTACGTG AGATGTTTGG CGTGCTCACC GCTAGCAATG CAAACAAGGT TATTATTATT TGTTCGGGTA AATTCACCCA GCAAGCTATA GATTTCGCCT CTGATAAGCC CGTTGTACTC ATTGACGGAG ACGAGCTGCT TTCACTTATC CATGATGTGC AAACGGAGCC AAAGGTAGAG GAGATAAAAA AGACCACTTG CCCTAGGTGC GGAAGTGATC TTGTTGAACG GCAAGCAAAG CGTGGAGCCC ATGCAGGCAA TACCTTTCTA GGTTGTTCTG CCTTTCCTAA ATGTCGTTAC ACAGAATAA
|
Protein sequence | MPRKNTSFAD LLFQAPWWVS VTTSAITYLL MGHLLPSIET NNQLINMVFK ALAVPAPYFA IFILLIAPFS FFNARRKAKQ LDAQKSIETI RQLHWRNFEE LVAEAYRRQG YRVTEGGFGA DGGIDLELRK GDERVIVQCK QWKAQKVGVS VVREMFGVLT ASNANKVIII CSGKFTQQAI DFASDKPVVL IDGDELLSLI HDVQTEPKVE EIKKTTCPRC GSDLVERQAK RGAHAGNTFL GCSAFPKCRY TE
|
| |