Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00261 |
Symbol | |
ID | 6775280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 279397 |
End bp | 280152 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642753689 |
Product | Tfp pilus assembly protein PilW |
Protein accession | YP_002124573 |
Protein GI | 196155084 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTAC CAATAGCACA GTACCAGCGC GGTTTTACGC TTATAGAGCT TATTTTAGTG ATCACCATTT TAGGCGTAAT TAGTGTATCT GTGGCGCAGG TGATTTCTTT AAGTGCGCAA ATTTATATAA CCGGTGCAGA GCGTACTCGC CTTGTTTCAG AAGCGCGCTT TATTATATTG CGATTGGAAA AAGAACTTCG AAATATTGTG CCTAACTCGG TCTCTTTTGA CGCTAGTTTA GGGTGCTTAA CCTACTATCC AATTGTTATG AGTGGTACAT ATACCGAAGA CCCTTTCGAT AATGAGCTGC ATTCTGTTGT ATTTGAAATG AAAGAGCCTA CAGCGGGAGA TAAATTAGTT ATCTACCCAA CAAGCCCGCA AAGTGTGACT GACAACAGTG TTGACTATAT TGAATCTACT GTCGCCACCG ATGATGAAGG TAATAATTTG GAGCATCAAT ATATTATTGA GTTAGGAGCC GTAAACACTC AATCCTCACC GGGGAAACGC TTTTTTTTGT TTAATGAGAA TCCAGTGTCA GTGTGTAAGG AGACCACTTC GCAAGGCGAG GCCTTGGTGC GAAGAGAAGG AACGAGTACA GGTATTATAG CTACTAATGT AAGTAGTTGG AGTGCAGACG TAATAACGCC AAGTTTGCGA CAAAACGCTT TGGTTGATAT AGACATGACG CTCACCAGTA GTAGCGACGA GTCTTTAGCT TTCTCGCATG AGGTACATTT CCCCAATGTT CCCTAA
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Protein sequence | MSLPIAQYQR GFTLIELILV ITILGVISVS VAQVISLSAQ IYITGAERTR LVSEARFIIL RLEKELRNIV PNSVSFDASL GCLTYYPIVM SGTYTEDPFD NELHSVVFEM KEPTAGDKLV IYPTSPQSVT DNSVDYIEST VATDDEGNNL EHQYIIELGA VNTQSSPGKR FFLFNENPVS VCKETTSQGE ALVRREGTST GIIATNVSSW SADVITPSLR QNALVDIDMT LTSSSDESLA FSHEVHFPNV P
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