| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0657 |
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| Symbol | |
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| ID | 6743457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 589051 |
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| End bp | 589827 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642750452 |
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| Product | type III secretion system inner membrane R protein |
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| Protein accession | YP_002121322 |
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| Protein GI | 195953032 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTTAA GTATATCTAT ACCATATCTC ATAACGTTCT TACTTATAAC GCTTAGAATA
TCTTCTATAG TATTTTTAGC ACCGATTTTT GGGGATTTGC CAAACAGCTT TAAGATATTT
TTTGTGATAG CTTTTAGTGT ATCGCTTTAT TATTACAACC CTGTAAAACC AGTCTATACA
GATAGTTTTA TAATATTAAC ACTGATGGCT TTGAAAGAAT TTAGCTTGGG TTTTATTATA
AGCTTGATAC TAAGATTCTT AGTAGATATT TTCTTTGTTT TTGGAGAATT CGTGTCTAGT
TCTCTTGGAT TGTCAAACGC CACTATCTTA AATCCGCTTA TGGGAAATTC TACAATTTTG
GGCACATACT TTAGTTATTT TTTCATGGGG CTTTTCGCAG CATCATCTGG TTTTGAATAT
ATTTACTTTA TTCTATCGGA AAGCCTTAAG AGTATACCGC TTGGAGTCTT TGATCTATAC
AACATGAGAC CTGAGTTTAT ATTAAATATC TTTTATAAAA GCTTTTATAC TGCTTTTCAA
TTAGCTCTTC CTATGATAGC TATAGGTCTT GTGATGAATA TAATTCTAGC AGCTATCAAT
AGGCTTATAC CTCAGATAAA CGTTTTCATG GTAGGCATGC CACTTCAAAC ACTTATAGGT
ATGATATTTT TGTTGCTTAT TTTCCCTCTA TTAGGGATAC TTATGCACCA AATATTTGAA
CATTATTTTA AATTTATGCT AGAGTTTACA AGGGGTTATC ATGGCCTCGG AAAATAA
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| Protein sequence | MTLSISIPYL ITFLLITLRI SSIVFLAPIF GDLPNSFKIF FVIAFSVSLY YYNPVKPVYT
DSFIILTLMA LKEFSLGFII SLILRFLVDI FFVFGEFVSS SLGLSNATIL NPLMGNSTIL
GTYFSYFFMG LFAASSGFEY IYFILSESLK SIPLGVFDLY NMRPEFILNI FYKSFYTAFQ
LALPMIAIGL VMNIILAAIN RLIPQINVFM VGMPLQTLIG MIFLLLIFPL LGILMHQIFE
HYFKFMLEFT RGYHGLGK
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