Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0322 |
Symbol | |
ID | 6519147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 332051 |
End bp | 334243 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642745481 |
Product | Rhs-family protein |
Protein accession | YP_002113306 |
Protein GI | 194735863 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0393811 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTTG TATCCACAAA TAATAAATCC GGTATGGGGG GGCTGACGAC AACCACGCCG CCGATAACAG GTGAAAACAG TGGAACTACA GCAGGTTCGG TTGCCGGAAG CGTGGCGGGA GCCGCAGAAG CGGCAGTGGA ACAGGCGCTG GGATCTCTGA TGGGCGACCT GCCTGAACCG TCGGGGTTGG TGAAAGCAGC GGTGGCTGCG GCGGCACAGG CTGCGGCAGC GGCGGGCGCG GCGCAGGATG TGATATCGGC ACTAATTTCT GGTGCAACCA GCGGGCCGGG CGCACATAAC GTGACGGTCA GCGGCAGCGC AGTTCCACCG CAGATGCTGC TGTTTTCCAG TCTGAACGGC TCGGAAGCTC TCGGTAGCTT GTTTACCTAC ATCGTACAGC TAAAAACGCC CGACACCCTG AATCTGGGCT ATGTCTCCCC CGCAGCCAAC CTGCCGCTTA AAGCCATGGT GGGCAAAGAT TTGTGCGTCA ACATCGAACT GGATGGCGGC GGCAAACGGC ATATCAGCGG GCTGGTCACG GCGGCGCGGG TGGTGGGCCA TGAAGGGCGT TCTGTTACCT ATGAGCTGCG TATGGAGCCG TGGGTAAAAC TGCTGACCCA CACCAGCGAC TACAAGGCAT TCCAGAATAA AACCGTGGTG GACATTCTCG ATGAAGTGCT GGCTGAGTAT CCGTATCCGG TGGAAAAGCG ACTGGTGGAA AGCTACCCGG TACGCACCTG GCAGGTACAG TACGGTGAAA CTGATTTTGA TTTTCTTCAG CGACTGATGC AGGAGTGGGG CATCTACTGG TGGTTTGAGC ACAGCGAGGA CAGCCACACG CTGGTGCTGG CGGATGCCAT CAGTACACAT CACGCCTGCC CGGATTCACC GGAGGTAGAA TGGCATCAAA AAGGGTTAAA GCTGGATAAA GCATTTATCC ACACCATTAT AGCCAATGAA AGTCTGCGTA CCGGGCAGTG GGTACTGGAT GATTTTGACT TTAAAAAACC GCGCTCGCGG CTGGCGAACA CAGTGGCAAA CCCGCGTGAA ACCGGCCATG CCAGTTACGA ACACTACGAA TGGCCGGGCG ATTATTTCGA CAAGGGCGAA GGCGAAATGC TGACGCGCAT TCGTATGGAA GCGCAGCGCA GCCCTGGCAG CCGGGTTCAC GGTGCCGGGA ATATCCGTAC GCTGATGACT GGCTACACCT TTGCGTTGAT GAATCACCCT ACGGCAGAAC TCAACCAGGA ATATCTGTTG GCGCAGACTA CGCTGTTTGT GCAGGACAAC GCGCAGCACA GCGGGCAGGA CCAGCACTTT ACCTTTTCCA CCCGTTTTGA ACTGCACCCG ACCCGTGAGG TGTTCCGCCC GCAGCGGACG GTGAGCAAAC CCCACACCAA AGGGCCGCAG AGCGCCATCG TCACCGGCCC GGCGGGCCAG GAAATCTGGA CGGATCAGTA CGGGCGGGTA AAGGTGCAGT TTGGCTGGGA CCGTTACGGC AAAATGGATG AAAACAGCTC CTGCTGGATA CGCGTCAGCT ACCCATGGGC GGGCAAAGGC TTCGGGATGA TCCAGATCCC GCGTATCGGC CAGGAAGTGC TGGTGGATTT CAAAAACGGC GATCCGGATC TGCCGATCAT CGTGGGGCGT ACCTACAACC AGGACACCAT GCCGCCGTGG GGACTGCCGG GAATGGCGTC GCAGAGCGGG ATCTTCAGCC ACTCGCTGTA TGGCGGGCCA ACGAACGGCA ACATGCTGCG TTTTGACGAC AAAACCGGCG CGGAGGAAGT GAAGTTCCAC GCGGAAAAAG ATCTCAACAC CACGGTGAAG AATAATGAAA CGCATACGGT TATGGTGGAT CGCACTAAAA CCATTATTAA AAATGAAACC AACAGTATTG GTGAGGACAG AAACACCACG GTAACGAAGA ATGACGGCCT TTCCGTAAAA CTGGCGCAGA CGATCAATAT CGGCACCACT TATCGTTTAG ATGTTGGCGA TCAATTCACG CTTCGCTGCG GCAATGCGGC GCTTGTTTTA CATAAGGACG GCTCCATTGA GTTTTGTGGC AAGCAACTGA TGTTACATAC CAGCGATGTC ATGCAACTGA TTGGTAAAGG TATTGATATG AACCCGGATG GCGGCACAGC CGTAACCGCC GATGATATTG CCCCCCTTCC CACCTCTGAA TGA
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Protein sequence | MSFVSTNNKS GMGGLTTTTP PITGENSGTT AGSVAGSVAG AAEAAVEQAL GSLMGDLPEP SGLVKAAVAA AAQAAAAAGA AQDVISALIS GATSGPGAHN VTVSGSAVPP QMLLFSSLNG SEALGSLFTY IVQLKTPDTL NLGYVSPAAN LPLKAMVGKD LCVNIELDGG GKRHISGLVT AARVVGHEGR SVTYELRMEP WVKLLTHTSD YKAFQNKTVV DILDEVLAEY PYPVEKRLVE SYPVRTWQVQ YGETDFDFLQ RLMQEWGIYW WFEHSEDSHT LVLADAISTH HACPDSPEVE WHQKGLKLDK AFIHTIIANE SLRTGQWVLD DFDFKKPRSR LANTVANPRE TGHASYEHYE WPGDYFDKGE GEMLTRIRME AQRSPGSRVH GAGNIRTLMT GYTFALMNHP TAELNQEYLL AQTTLFVQDN AQHSGQDQHF TFSTRFELHP TREVFRPQRT VSKPHTKGPQ SAIVTGPAGQ EIWTDQYGRV KVQFGWDRYG KMDENSSCWI RVSYPWAGKG FGMIQIPRIG QEVLVDFKNG DPDLPIIVGR TYNQDTMPPW GLPGMASQSG IFSHSLYGGP TNGNMLRFDD KTGAEEVKFH AEKDLNTTVK NNETHTVMVD RTKTIIKNET NSIGEDRNTT VTKNDGLSVK LAQTINIGTT YRLDVGDQFT LRCGNAALVL HKDGSIEFCG KQLMLHTSDV MQLIGKGIDM NPDGGTAVTA DDIAPLPTSE
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