| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4029 |
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| Symbol | |
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| ID | 6483288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3917726 |
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| End bp | 3920044 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642739288 |
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| Product | alpha-xylosidase YicI |
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| Protein accession | YP_002042998 |
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| Protein GI | 194442737 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0205936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA GCGACGGAAA CTGGCTGATC CAGCCTGGCC TTAATTTGAT TCACCCGGTT
CAGGTGTTCG ACGTTGAACA GCACGGGAAT GAGATGGTGG TCTATGCCGC GCCGCGCGAT
GTCCGCGAAC GAACCTGGCA ACTGGATACC CCGTTGTTTA CCCTGCGCTT TTTCTCGCCG
CAGGAAGGAG TGATAGGTGT ACGGATGGAA CACTTCCAGG GCGCTTTGGA TAACGGCCCA
CATTATCCGC TCAATGTCTT GCAAGATATC AACGTGGAGA TGCAGAACAA CGCCGAATTT
GCCGAACTCA AGAGCGGCAG CCTGAGCGTG CGCGTCACCA AAGGCGAGCT CTGGTCACTG
GATTTTCTGC GCAACGGTGT ACGTATCACC GGTAGCCAGT TGAAGAATAA CGGCTATGTG
CAGGATACCA ACAGCGGGCG CAACTACATG TTCGAGCGTC TGGATCTCGG CGTGGGCGAA
ACCGTCTACG GGCTTGGCGA GCGTTTTACC GCGCTGGTGC GCAACGGTCA GACGGTGGAG
ACCTGGAACC GTGACGGCGG CACCAGTACC GAGCAGTCTT ACAAGAACAT CCCGTTCTAT
ATCACCAACC GTGGCTACGG TGTGCTGGTG AATCATCCGC AGTGCGTGTC GTTTGAAATT
GGCTCCGAGA AAGTCTCCAA AGTTCAGTTC AGCGTTGAGA GCGAGTATCT GGAATACTTC
GTCATCGACG GCCCGACCCC GAAAGACGTG CTGAACCGCT ATACCCAATT TACGGGTCGT
CCGGCGCTGC CGCCCGCCTG GTCGTTTGGC CTGTGGCTGA CCACCTCATT CACCACCAAC
TACGACGAAG CGACCGTTAA CAGCTTTATC GATGGTATGG CCGAGCGCAA TCTGCCGCTG
CACGTCTTCC ACTTCGACTG TTTCTGGATG AAGGCTTTCC AGTGGTGCGA TTTTGAATGG
GACCCGGTGA CTTTCCCCGA TCCGAAAGGG ATGATTCGCC GCCTGAAAGC GAAAGGGCTG
AAAGTCTGCG TGTGGATTAA CCCCTACATC GGCCAGAAAT CCCCGGTTTT CCAGGAGCTG
AAAGAGAAAG GGTATTTACT TAAACGCCCG GACGGCTCCT TGTGGCAGTG GGATAAATGG
CAGCCGGGAC TGGCGATTTA CGACTTCACC AACCCGCAAG CCTGCGAATG GTATGCCGAC
AAGCTGAAGG GCCTGGTGGA GATGGGAGTG GACTGCTTCA AAACTGACTT CGGCGAACGC
ATTCCAACGG ATGTGCAGTG GTTTGATGGT TCAGATCCAC AGAAAATGCA CAACCATTAT
GCCTACATCT ACAACGAACT GGTGTGGAAC GTGCTGAAAG AGACCGTGGG CGTTGAAGAG
GCGGTGCTGT TCGCCCGTTC CGCCTCGGTG GGCGCGCAAC AGTTCCCGGT GCACTGGGGC
GGCGACTGCT ACGCCAACTA CGAATCGATG GCGGAAAGCC TGCGCGGCGG GCTGTCCATC
GGCCTGTCAG GGTTTGGCTT CTGGAGTCAC GATATTGGCG GATTCGAGAA TACCGCGCCG
GCGCATGTCT ACAAGCGTTG GTGCGCATTC GGCTTGCTCT CCAGCCACAG CCGCCTGCAC
GGTAGCAAAT CCTACCGGGT TCCGTGGGCC TATGACGACG AGTCCTGTGA CGTGGTGCGC
TTCTTCACCG AACAGAAGTG CCGGATGATG CCGTATCTGT ATCGGGAAGC GGCGCGCGCC
AACGAAGCCG GCACGCCAAT GATGCGGGCG ATGATGCTGG AGTTTCCGGA CGATCCGGCG
TGTGATTATC TTGATCGCCA GTACATGCTG GGAGATGCGG TCATGGTAGC GCCGGTATTT
AGTGAAGCGG GCGACGTGGA GTTCTACCTG CCAGAAGGAC GCTGGACGCA CCTGTGGCGC
AACGATGAAG TGCAGGGCAG CCGCTGGCAT AAACAGCAGC ATGACTTCCT GAGCCTGCCA
GTGTACGTGC GTGACAATAC ACTACTGGCG CTGGGCAACA ATAGCCAGAA GCCCGATTAC
GCCTGGCATG AGGGTACGGC CTTCCAGTTA TTCCATCTGG ATGACGGTTG CGAAGCGGTC
TGCGAAGTCC CTGCTACGGA TGGTTCGACA ATCTTTACGC TGCAGGCGAA ACGCACAGGC
AATACCATTA CGGTGAGCGG CGAAGGCGAG GCGCGCAACT GGACGCTGTG TCTGCGTAAT
ATTACGCAGA TTAGCGGTGC CAAATGCGGC TCATATGCGG GAAGTGAACT GGGCGTAGTG
GTCACCCCGC AGGGAAATGA AGTGGTGATT ACGCTTTAA
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| Protein sequence | MKISDGNWLI QPGLNLIHPV QVFDVEQHGN EMVVYAAPRD VRERTWQLDT PLFTLRFFSP
QEGVIGVRME HFQGALDNGP HYPLNVLQDI NVEMQNNAEF AELKSGSLSV RVTKGELWSL
DFLRNGVRIT GSQLKNNGYV QDTNSGRNYM FERLDLGVGE TVYGLGERFT ALVRNGQTVE
TWNRDGGTST EQSYKNIPFY ITNRGYGVLV NHPQCVSFEI GSEKVSKVQF SVESEYLEYF
VIDGPTPKDV LNRYTQFTGR PALPPAWSFG LWLTTSFTTN YDEATVNSFI DGMAERNLPL
HVFHFDCFWM KAFQWCDFEW DPVTFPDPKG MIRRLKAKGL KVCVWINPYI GQKSPVFQEL
KEKGYLLKRP DGSLWQWDKW QPGLAIYDFT NPQACEWYAD KLKGLVEMGV DCFKTDFGER
IPTDVQWFDG SDPQKMHNHY AYIYNELVWN VLKETVGVEE AVLFARSASV GAQQFPVHWG
GDCYANYESM AESLRGGLSI GLSGFGFWSH DIGGFENTAP AHVYKRWCAF GLLSSHSRLH
GSKSYRVPWA YDDESCDVVR FFTEQKCRMM PYLYREAARA NEAGTPMMRA MMLEFPDDPA
CDYLDRQYML GDAVMVAPVF SEAGDVEFYL PEGRWTHLWR NDEVQGSRWH KQQHDFLSLP
VYVRDNTLLA LGNNSQKPDY AWHEGTAFQL FHLDDGCEAV CEVPATDGST IFTLQAKRTG
NTITVSGEGE ARNWTLCLRN ITQISGAKCG SYAGSELGVV VTPQGNEVVI TL
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