Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0018 |
Symbol | |
ID | 6482362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 16499 |
End bp | 17020 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642735463 |
Product | hypothetical protein |
Protein accession | YP_002039245 |
Protein GI | 194446320 |
COG category | [R] General function prediction only |
COG ID | [COG3926] Putative secretion activating protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.377986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.533928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCCAA TTATAGATGG AATTATTGCG CTTGAAGGCG GTTACGTATT TAACCCTAAA GATAAAGGCG GCGCCACCCA TTGGGGCATT ACCGAAGCCA CGGCGCGAGC GCATGGCTAT GCTGGCGATA TGCGGGATCT GACCCACGCT GAAGCCTACG CGATTCTCGA AGAGGATTAC TGGATAAAAC CAGGTTTTGA CGTCATCTCG ACGCTATCGT GGCCAGTCTC CTTCGAGCTG TGCGATGCGG CAGCTTACCA CCCCAGCGCG TGGCTGCAAC GCTGGTTGAA CGTCTTTAAT CACGAAGGTA AACGCTACCC GGATATTCAT GTGGATGGCA ATATTGGCCC GCGGACGCTT GCCGCTCTCG AACATTATTT GGCCTGGCGA GGCCAGGAAG GGGAAGCCGT TTTGGTGAAA GCCCTCAATT GCAGTCAGGG CACGTACTAC TTAAACGTTG CTGAGAAAAA CCACAATAAC GAACAATTTA TTTATGGCTG GATCAAGAAT AGAGTGACCT AG
|
Protein sequence | MNPIIDGIIA LEGGYVFNPK DKGGATHWGI TEATARAHGY AGDMRDLTHA EAYAILEEDY WIKPGFDVIS TLSWPVSFEL CDAAAYHPSA WLQRWLNVFN HEGKRYPDIH VDGNIGPRTL AALEHYLAWR GQEGEAVLVK ALNCSQGTYY LNVAEKNHNN EQFIYGWIKN RVT
|
| |