Gene SNSL254_A0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0018 
Symbol 
ID6482362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp16499 
End bp17020 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content51% 
IMG OID642735463 
Producthypothetical protein 
Protein accessionYP_002039245 
Protein GI194446320 
COG category[R] General function prediction only 
COG ID[COG3926] Putative secretion activating protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.377986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.533928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAA TTATAGATGG AATTATTGCG CTTGAAGGCG GTTACGTATT TAACCCTAAA 
GATAAAGGCG GCGCCACCCA TTGGGGCATT ACCGAAGCCA CGGCGCGAGC GCATGGCTAT
GCTGGCGATA TGCGGGATCT GACCCACGCT GAAGCCTACG CGATTCTCGA AGAGGATTAC
TGGATAAAAC CAGGTTTTGA CGTCATCTCG ACGCTATCGT GGCCAGTCTC CTTCGAGCTG
TGCGATGCGG CAGCTTACCA CCCCAGCGCG TGGCTGCAAC GCTGGTTGAA CGTCTTTAAT
CACGAAGGTA AACGCTACCC GGATATTCAT GTGGATGGCA ATATTGGCCC GCGGACGCTT
GCCGCTCTCG AACATTATTT GGCCTGGCGA GGCCAGGAAG GGGAAGCCGT TTTGGTGAAA
GCCCTCAATT GCAGTCAGGG CACGTACTAC TTAAACGTTG CTGAGAAAAA CCACAATAAC
GAACAATTTA TTTATGGCTG GATCAAGAAT AGAGTGACCT AG
 
Protein sequence
MNPIIDGIIA LEGGYVFNPK DKGGATHWGI TEATARAHGY AGDMRDLTHA EAYAILEEDY 
WIKPGFDVIS TLSWPVSFEL CDAAAYHPSA WLQRWLNVFN HEGKRYPDIH VDGNIGPRTL
AALEHYLAWR GQEGEAVLVK ALNCSQGTYY LNVAEKNHNN EQFIYGWIKN RVT