Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_4003 |
Symbol | |
ID | 6474897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 4522966 |
End bp | 4526346 |
Gene Length | 3381 bp |
Protein Length | 1126 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642733216 |
Product | hypothetical protein |
Protein accession | YP_002030385 |
Protein GI | 194367775 |
COG category | [S] Function unknown |
COG ID | [COG4913] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.417635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.020693 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTATCT CCAAGCACAC TCCCGCCCTG TTCAACGAAG GCCTGCCGGA TCCGCGCCTG CAGCAGTTCC GCATGCGCCG CCTGCAGGTG CACAACTGGG GCACCTTCAA CGGCCTGACC GAAGTGCCGA TCGCCGAGCG CGGCTTCCTG TTCGTCGGCC GTTCCGGCTC GGGCAAGTCG ACCCTGCTCG ATGCCATGTC CGCGCTGCTG ACGCCGCCGG CCATCGTCGA CTTCAACGCT GCCGCGCGTG AAGCCGAGCG CAGTGGCCGC GACCGCAACC TGGTGTCCTA TGTGCGTGGC GCGTGGGCCG ACCAGCAGGA CAGCGGTACC GGCGAAATCG CTACGCAGTA CCTGCGCAAG GGCGCGACCT GGACCGCACT GGTGCTGGAA TACCGCGCCG GCGACGGCCG CGTGGTCAGC CTGGTGCGCC TGCTGTGGAT CTCCGGCAAC GGCACCTCGG CCGGCGACGT GCGCAAGCAC TACATGATCG CCGAGCGTCC GTTCGACATC GCCAAGGATC TCGGCGGCTT CGACCTGGAC CTGCGCAAGC TCAAGCAGAA GCTGGCCGAC CTGCACCACT TCGACACGTT CTCCGGCTAC GCCGAGCGCT TCCGCGACCT GCTCGGCATC GACAACGAGA TGGCGCTGCG CCTGCTGCAC AAGACGCAGT CGGCGAAGAA CCTGGGCGAC CTCAATGTCT TCCTGCGCGA CTTCATGCTC GACACGCCGA AGACCTTCGA CGCCGCCGAG CGCCTGGTCA GCGACTTCGC CGAACTCGAT GGCGCGCACC AGGCCGTGGT CACCGCTCGC CGCCAGGTGG AAACCCTGCT GCCGGCACGC GCCTACTACG GCGACCTGAA GCAGATGCAC CGCCAGCGTG GCGACGATGA AGCGCTGAAG CTCGGCGTCG ACAGCTTCCG CGAAAGCCGC CGCCAGGCAC TGATCGAAGC ACGCCTGCGC GAGATGGACG TGCGTGACCG TGGCCTGCTC GGCGAAGAAG CCCAGCGCCG TGCCGCGCTC GACAACCACA CCGAGCGCCT GGCCGAACTG GAGCTGCAGC GCCGTCAGCA GGGCGGTGAG CGCATCGAGG AACTGGAACG TGAGCAGGGC CGTGCCGAAG CCGAGCGCGA CCGCCGCAAG GCCAAGCGTG ACCAGGCCCA GGAAGCGGCA CAGCAGCTGC AGGCCGAACT GCCCGATGAC GCCCATGGCT TCGCCGAACT GGTCGAGCGC GCGCAGAACG AACTGCAGGA CCGCCAGCGT GCCTCGGCGG CACTGGACGA TGCGATCAGC GATCGCCTCG GCGGCAAGCG CGACGACGAG CGCCGCTTCG GTGAAGTGCG CAGCGAACTC GAAGCGATGC AGCGCACCCC CTCCAACATT CCGGCGCCGA TGCAGAAGCT GCGCGCACGC CTGGCCGAGG AAACCGGCAT CGCCGAAGCG GCGCTGCCGT TCGTCGGTGA GCTGATCCAG GTCCGCTCGG AAGAGCAGGG CTGGCAGGGT GCCATCGAGC GCGTGCTGGG CGGTTTCGCG TTGTCGCTGC TGGTCGATGA CAAGCACTAC AACGAGGTCG CCGAGTGGGT GAATCGTACC CACCTGGGCA TGCGCTTCAC CTATTACCGC GTGCGCCGCA ACGATGATGC GTTCGCCCGT GAGCCATCGG CGAAGTCGCT GCTGCACAAG CTGGAACTGC GCGACCACGT GTTCGAAAGC TGGCTGCGGC GTGAGCTCGG CAAGCGCTTC GACTACGAGT GCGTGGATGC CAAGCAGCTG CGCAACGTCG ACCGCGGCAT CACCCGCGAA GGCCAGGTCA AGCATCCGGG CGACCGCTTC GAGAAGGACG ACCGCAGCGC GGTGGGTGAC CGCCGTCGCT GGATCCTTGG CTTCAACAAC CACGACAAGG TGGGCGCCTT CGAGCGCGAA GCACAGGAAC TGGCCAAGCG CATCGCCAGC TGCGAGACCG ATATCGCGCG GCTGCGCGGC CAGCGTGACC GCGACAATGA ACGTCGCCTG GCCTGCCACG AACTGGTCAG CATCAGCTGG AACGAGATCG ACATTGCCGC CCCGCAGCAG CGCCTGAGCG ACATCGAGGC CACCCTGCGC GACCTGCGCG AAGGCAATGC CGATCTGGCC AAGCTGGCCA AGCAGATCGA CGCCGTGCGC GCCGACATCG AGCAGTCCCG CCGCACCTAT GAGGACGTCC GCGTCGAGCG CGGCCAGCTG GTCAAGGAAC GAGATCGCTT GGACCGTGCA CGCCAGCAGA GCCGTGCACT GGTGCTGCCG AGCCTGGCCC AGGAGCACGA GGCTGGACTT GCCGAGCGCC TGCAGGAGCA GGGCCCGCTC AGCCTGGAAA CGCTGGAAGC GCACATGCGC CAGGTCAGCA ACGCACTGAA CGAGCAGCTG TCGTCTTCGC AGCAGGACCT CAACCGCATC GAGAACCAGC TGATCGGCTG CTTCCGCCGC TTCATCCAGC AGTGGCCGGA GGAATCGGGC GACTTCACCG TGTCGGTGGC CTCGGCCGAA GACTTCCTGG CCCGCCTCGA ACGCCTGGAG CGTGATGGCC TGCCGCAGCA CGAAGAGCGC TTCTTCGACC TGCTGCAGAA CCAGAGCAAG AACAACCTGC TGGCGCTGCA GCGTCACAGT GCCGAGGCCC GCAAGTCGAT CGGCCAGCGC CTGGACGAAG TGAACGCGAG CCTGGAACAG GTGCCGTTCA ACCGCGGCAC GCTGCTGACC ATCGAACTGA ACGATCGCCG CCTGCCGGAA GTCGGCGAGT TCCACCTGCA GCTGCGCGAG GTGCTGTCGC AGCAGCAGAC CGAGCAGCGT GAGCTGGCCG AATCGCAGTT CACCGTGCTG CGCCAGCTGG TCAACCGCCT GGGCTCACAG GAAGGCGAAG ACAAGCGCTG GCGCGAGCTG GTGCTGGACG TGCGCATGCA CGTGGAGTTC ATCGGCGTCG AGCTGGATGC GGAGACGCGC CAGCAGGTCG AGATCTACCG CAGCGGCGCT GGCAAGTCCG GCGGCCAGCG CCAGAAGCTG GCCACCACCT GCCTGGCCGC GGCCCTGCGC TACCAGCTCG GTGGCGCCGA CAGCCAGCTG CCCAGTTACG CCGCGGTCGT GCTCGACGAA GCCTTCGACA AAGCCGACAA CGAGTTCACC GCACTGGCGA TGAACATCTT CGACAACTTC GGCTTCCAGA TGGTGGTCGC CACCCCGCTG AAGTCGGTGA TGACGCTGGA ACCGTTCATC GGTGGCGCCT GCTTCGTCGA AATCAGCGGC CGCCACGACT CCGGTGTGCT GCTGATCGAG TACGACGAAG AAGGCAAGCG CCTGAAGCTG CCCGAGCGCA GCCGCCAGCA GGCCAACGAA CCGGAAGAAG CGGAGGCCTG A
|
Protein sequence | MAISKHTPAL FNEGLPDPRL QQFRMRRLQV HNWGTFNGLT EVPIAERGFL FVGRSGSGKS TLLDAMSALL TPPAIVDFNA AAREAERSGR DRNLVSYVRG AWADQQDSGT GEIATQYLRK GATWTALVLE YRAGDGRVVS LVRLLWISGN GTSAGDVRKH YMIAERPFDI AKDLGGFDLD LRKLKQKLAD LHHFDTFSGY AERFRDLLGI DNEMALRLLH KTQSAKNLGD LNVFLRDFML DTPKTFDAAE RLVSDFAELD GAHQAVVTAR RQVETLLPAR AYYGDLKQMH RQRGDDEALK LGVDSFRESR RQALIEARLR EMDVRDRGLL GEEAQRRAAL DNHTERLAEL ELQRRQQGGE RIEELEREQG RAEAERDRRK AKRDQAQEAA QQLQAELPDD AHGFAELVER AQNELQDRQR ASAALDDAIS DRLGGKRDDE RRFGEVRSEL EAMQRTPSNI PAPMQKLRAR LAEETGIAEA ALPFVGELIQ VRSEEQGWQG AIERVLGGFA LSLLVDDKHY NEVAEWVNRT HLGMRFTYYR VRRNDDAFAR EPSAKSLLHK LELRDHVFES WLRRELGKRF DYECVDAKQL RNVDRGITRE GQVKHPGDRF EKDDRSAVGD RRRWILGFNN HDKVGAFERE AQELAKRIAS CETDIARLRG QRDRDNERRL ACHELVSISW NEIDIAAPQQ RLSDIEATLR DLREGNADLA KLAKQIDAVR ADIEQSRRTY EDVRVERGQL VKERDRLDRA RQQSRALVLP SLAQEHEAGL AERLQEQGPL SLETLEAHMR QVSNALNEQL SSSQQDLNRI ENQLIGCFRR FIQQWPEESG DFTVSVASAE DFLARLERLE RDGLPQHEER FFDLLQNQSK NNLLALQRHS AEARKSIGQR LDEVNASLEQ VPFNRGTLLT IELNDRRLPE VGEFHLQLRE VLSQQQTEQR ELAESQFTVL RQLVNRLGSQ EGEDKRWREL VLDVRMHVEF IGVELDAETR QQVEIYRSGA GKSGGQRQKL ATTCLAAALR YQLGGADSQL PSYAAVVLDE AFDKADNEFT ALAMNIFDNF GFQMVVATPL KSVMTLEPFI GGACFVEISG RHDSGVLLIE YDEEGKRLKL PERSRQQANE PEEAEA
|
| |