Gene Smal_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3872 
Symbol 
ID6474755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4359221 
End bp4360405 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content66% 
IMG OID642733074 
ProductABC transporter sodium permease 
Protein accessionYP_002030254 
Protein GI194367644 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1668] ABC-type Na+ efflux pump, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA TGACGACCCT GATGACGGTG ATGCGCAAGG AACTGCGCGA CCTTTCCCGT 
GATCGCCGCA CGCTGCTGCT GACCCTGCTG TTCGGGCCGC TGCTGTACCC GGTGCTGCTG
CTGGGCATGG GCAAGCTGGC CGAGAGCCGG GTACGCACCC AGATCGAACA GCCGCTGCAG
ATTCCAACCA TCGGTGCAGA GAATGCGCCG AACCTGGTGC GCTTCCTCGC CGCACAGGGG
CTCAATACCG CACCGGCGCC GAAGGACCTG GCCGAGGCCA TCCGCAGCCA GGACATCGAC
GTGGCGCTGC GCATCAGCGA TGACTTCGGC AAGGACTGGG CCGACGGCAA GCCGGCGCTG
GTGGAAGTGA TCAAGGACAG TACCCGCCGT GCCGCTGAAG TGCCCAGTGC GCGGCTGGAA
GCGGCGCTGG CCACCTACAA CGGCCAGGTC GGTGCGTTGC GATTGATGGC GCGTGGCGTC
GACGCGCAGG TAGCGCGGCC GCTGGACGTG GCACGCCAGG ACCTGGCCAG TGCCGAGGCC
AAGCGCGGCA TGATCCTGTC GATGCTGCTG CCGGTGCTGC TCACGCTGAC CTCGTTCATT
GGCGGTGCCT ATCTGGTGAT GGACGCCACC GCCGGCGAGC GCGAGCGGCA GTCACTGGAA
CCGCTGCTGG CCACGCCCGG CTCGCGCAGC GCGATCGTCA GCGGCAAGAT CGCGGCTGCC
TGCGTGGTTG GCTTCGTGTC ACTGCTGCTG ACCCTGGTCG CATTCAAGGT GAGCGCACAG
ATCGCGCCCG GCAACATCGG CCGCCAGTTC AACATGAACG TCGCCTCGAT GCTGCAGATG
CTGCTGGTGA TGGTGCCGAT GCTGATGATC GGCACCTCGC TGTTGACCTT CCTGTCGGCG
GCGGCAAAGA GCATGAAGGA AGCGCAGAGC CATATGACCT GGCTGATGCT GCTGCCGATG
ATGCCTGGCT ACGCACTGGT GGCGTACCCG CTGAAGAGCG AGCTGTGGCA GTACGCCGTG
CCGTTCCTGT CGCAGAACCA GATGCTGTTG AAGGTGATCC GCCATGAGAC GATCACGCCG
GCGGTGTGGG CCATCTATCT CGGTGCCAGC CTCGGCCTGG CCGCACTGCT GTGGTTCGCC
GTCGTGCGCC GTTACCACAA CGAGCGCCTG GCGATCTCCG GCTGA
 
Protein sequence
MSMMTTLMTV MRKELRDLSR DRRTLLLTLL FGPLLYPVLL LGMGKLAESR VRTQIEQPLQ 
IPTIGAENAP NLVRFLAAQG LNTAPAPKDL AEAIRSQDID VALRISDDFG KDWADGKPAL
VEVIKDSTRR AAEVPSARLE AALATYNGQV GALRLMARGV DAQVARPLDV ARQDLASAEA
KRGMILSMLL PVLLTLTSFI GGAYLVMDAT AGERERQSLE PLLATPGSRS AIVSGKIAAA
CVVGFVSLLL TLVAFKVSAQ IAPGNIGRQF NMNVASMLQM LLVMVPMLMI GTSLLTFLSA
AAKSMKEAQS HMTWLMLLPM MPGYALVAYP LKSELWQYAV PFLSQNQMLL KVIRHETITP
AVWAIYLGAS LGLAALLWFA VVRRYHNERL AISG