Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3577 |
Symbol | |
ID | 6474457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 4029247 |
End bp | 4030785 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 642732776 |
Product | membrane-flanked domain |
Protein accession | YP_002029959 |
Protein GI | 194367349 |
COG category | [S] Function unknown |
COG ID | [COG3428] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.298166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCAGC CGCCCCCCCT GCCCGCGTCG CTGCCCAACG GTGGCGAGGA TCATCGCCTG CACCCGTGGT CGTGGCTGTT CGTGCTGCTG ATGCAGCTGC GCCACTACTT CCTGCCGCTG GTGGCGCTGC TGGTGTTCGG CCAGCGCGGT GACCGCGATC CGATGTGGGC CCAGCTCATT CCGCTGTCGG CGATTGCCGT GCTGGTGCTG GTGTCGGTGC TGCAGTACCT CAGCTACCGC TACCGCATCG GCAGCGATGC GATCACCGTG CGCAGCGGCC TGCTCGCGCG CAACCGGCGC GAGATTCCGT TCGCCCGCAT CCACAACGTG GAAGTGCGGC AGAACCCGCT GCACCGCCTG TTCGGCGTGG CCGAGCTGCG CCTGGAATCG GCCGGCGGCG TGCGTCCGGA AGCGGAGATG CGGGTACTGA AGCTGGACCA GGCACTGGCC TTGGAACGGC TGGTGCGCCA ACGCGGGCAG GCGCCACAGG CTGACGACGT GGCCACATCA GGGCAGGTGG CCGACGCTGA CAGCGAACAC GTGTTGCTGC GCCTGTCGAG CTGGGACGTG GTGCGCATGG GGCTGCTCTC CAACCGCGGT TGGGCGCTGG CGATCGCCGC GTTCGGCGTG CTGTTCCAGA CCGTGCCGCG GCCGGTGATG GACGACGCCC TCCAGCGCGG CGGCCGCGAG GCCTTCGGCT ATGCCAGCCA CCTGCACCCC GGCGTGGCCG GCGCCTTCCT GCTGCTGGCC GCGGCCTTGC TGCTGGGGTG GCTGGCACTG CGTGCGCTGT CGGTGGTGCT GACCCTGCTG CGCTACCACG GCTTCACCCT CAGTGAGCAG GAGCGCCGCC TGACCGTATC GGCCGGCCTG CTCAGCCGCA CCCGCAGCAG CGTGGCGCGG CGCCGCATCC AGGCCTGGAC ACTGCGCGAA AGCACCCTGC ATCGCTGGTT CGGCCTGCGC CAGCTGCGCA TCGACAGCGC CGCTGGCGGG CCCTCGCGCG ATGAGGACCG CGCCCTGCGC GAACTGGCGC CGCTGGCGTC CCGTACGCGT TGCGAGCAGC TGGTGCAGCA CCTGCTGCCG CAGCTGCAGT GGCCGCCGCT GCAGTGGCAG GCCATTCCGC AGCGTGGCTG GTGGCGGTTG TGCCTGGGCG CGCTGCTGGT GGTGCCCCTG CTGGCCGTGG CCGGGTACTG GCGCTGGGGG CCCTGGGGCC TGGTAGTGCT GGCCTGGCTG CCGGTGGCAC TGCTGGTCGC GCACCGGCAG ATGGCGCGCA TGGGCTGGTA CCTGGACGAT CATTACGTCG CGGTGCGCGG CGGCTGGTGG AAGCGCTGGT GGCGCTGGGC CGAACTGGAC AAGGTGCAGG GCCTGCGCCT GCAGCGTTCG CCGCTGGACA AGCTGCTGGG CACCAGCAGC CTGCAACTGG ACACCGCCGG TGCGCATGGC GACGTGGCGC TGACCCTGCA CCACCTGCCG CGCGCGCAGG CGCAGCAGGT GATGGAGCAG TTGGCTGCGG CGCTGGCACG GCGCAAGCTG CGCTGGTAA
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Protein sequence | MSQPPPLPAS LPNGGEDHRL HPWSWLFVLL MQLRHYFLPL VALLVFGQRG DRDPMWAQLI PLSAIAVLVL VSVLQYLSYR YRIGSDAITV RSGLLARNRR EIPFARIHNV EVRQNPLHRL FGVAELRLES AGGVRPEAEM RVLKLDQALA LERLVRQRGQ APQADDVATS GQVADADSEH VLLRLSSWDV VRMGLLSNRG WALAIAAFGV LFQTVPRPVM DDALQRGGRE AFGYASHLHP GVAGAFLLLA AALLLGWLAL RALSVVLTLL RYHGFTLSEQ ERRLTVSAGL LSRTRSSVAR RRIQAWTLRE STLHRWFGLR QLRIDSAAGG PSRDEDRALR ELAPLASRTR CEQLVQHLLP QLQWPPLQWQ AIPQRGWWRL CLGALLVVPL LAVAGYWRWG PWGLVVLAWL PVALLVAHRQ MARMGWYLDD HYVAVRGGWW KRWWRWAELD KVQGLRLQRS PLDKLLGTSS LQLDTAGAHG DVALTLHHLP RAQAQQVMEQ LAAALARRKL RW
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