| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2954 |
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| Symbol | |
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| ID | 6475701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 3289536 |
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| End bp | 3292379 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642732149 |
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| Product | autotransporter-associated beta strand repeat protein |
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| Protein accession | YP_002029336 |
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| Protein GI | 194366726 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0154236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00450699 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACGCA CGACGATGGT GAGGTCTGTC CTGGCAACTG CGCTGGCGAT GGCGCTGACG
GCCTGTGGCG GCGGCGGGGG CGGCAGCAAC GTGCGCGTCG ATCCGCCGCC GACCACGCCC
ACGCCGCCGA CGCCACCCCC ACCCACTACG CCACCGCCGG CCAAACCGCA GGAGCCGACG
TTTGATGCGC ATCTGGCAGT CACCAACGCG CGTGCCGCAC AGGCCGCCGG ACTGACCGGT
CAGGGTGTGC GCATCGGTAT CGTTGACTCG GGCGTGCAGC GCACTGCGGT GGCCCTGAAT
GGACGGGTGC TGGCCAACTT CAACTACATC GATCCGGCCA GGAACAATCT GGGCGTTGAC
GACGTGGTCG GCCATGGCAC CGCGGTGGCC AGCCTGGCCG CCGGCGCAGC GGTGGGCTCC
TGGCCGGGCG GCATCGCGCC GGGTGCGCAG ATCGTCTCGG CACGGATCAT TTCCGACAAG
CCGCCGACCG ATGACGGCAG TGGCCAGGGC AATGCCTTCA GCGGCCCGCT GGGCGTGGCC
CAGGTCCACC AGGACCTGAT CAGCTACAAC GTGAAGGTGA TGAACAACTC ATGGGGCGGC
CTGTACTGGA CCGACCTGCC GACCACCGCG CAGGTCGCTG CCGAGTACCG TCCGTTCGTG
ATCAACCACG GTGGCCTGGT GGTGTTCGCT GCCGGCAATG ATGGCCGCAG CGAACCGAGC
AGCCTGGCCG CCCTGCCCAG CCAGAAGGGC GTGGCCGGCT CACTGCCCGC GGCCGATCTG
GAGCGCGGCT GGCTGGTGGC GACCGCGGTC GATCCGTACA CCCCCAGTGC ACTTGCCAGC
TACGCCAACG CCTGCGGCCA GGCAGCGCGC TACTGCCTGG CAGCACCGGG CAGCGCGGTC
TATCCCGATG CCAATGGCGG CAGCTACTAC TGGAACTACG GCACCTCGTT CGCCGCTCCG
TTGATCTCCG GCGCCGCCGC GCTGGTCTGG CAGCGCTACC CGTACTTCGA CAACAACCTG
GTGCGGCAGA CCCTGCTGGG CACCGCCAAG GACATCGGCG CGCCCGGCGT GGATGCGGTG
TTCGGCTACG GCCTGCTCGA CATCGGTCGT GCGATCAAGG GCCCAGGTCG CTTCGACTGG
GGTGACGTTG TAGCCAATGT GGATGTTGCC TCGACCGGTT CGCTGTGGAG CAACGATATC
GTCGGCAGCG GCGGGCTGGT CAAGCAGGGC GGGGGCACCC TGGTGCTGGC CGGCAACAAC
AGCTACACCG GTGCCACCCG CATCGAACGC GGCATCCTGT CGCTGCAGAA CGGTGGCGTG
ATCCGTTCCA ACGTGACCAT CCTCGGCCAG TCCGATCCGG ATTCGACCGG CCTGCAGTTC
AATGGCGGCA CGCCCCGCGT GATCGGCAAT GTGATCAATG GCAGCAGCGT GTTCCTGACC
ACCGGCAACA CCACTGGCAC CATCGAGGGT GACTATACCC AGCAAGCCGG CGCGCAGCTG
ATGATCGCAC TCGGTGCCAA GGCCCTGCAG GTCACCGGCA ATGCGAAGAT CGACGGCGGA
GTGCGCGTGC ACGGCGTTGT CACCGGCTAC GTGCCGCAGA ACGGTGCCCG CCAGGATCTG
ATCCATGCGG TGGGCAGCCT GAGCGGCACT TTCAGCACCC CGGCGACATC AAGCGGCCTG
GACGGTGTCA GCCTGCTGCA GAGCAGCTAT GGCTATGACA GCAACAACGC CTGGTTGAAC
CTGACACAGG TGAGCGTGAG TGCAGCGGCC ACTGGCCTGG GTGTTTCTGC ACAGGCTGCG
GCGCAGCGCC TGGAAGGGGC GTTCGCTGCA CTCGACCGCA ATGCTGGCCT GCAGGGATCG
GCGTTTGGCA CGGCGGCCGG TGCGCTGCAG AGGACCGGCG GCGGCAGCGA AGGTTTGGCC
GCCAGCCTGC AGAGCCTGTC CGGGCAAGCG CACGCGAGGG CCGAGTCGGC CACCTTCGAC
AGCATCGACA TGTCGCGGCG CGCGATCGCC GAGCGCTTCG ATCGCGTGCA GGCTGCACCG
CGGCTGCGCG GCACCTGGCA GAGCGCGCTG GGCGAGGCCG GGCAGGGCAG CTTCGCCGGC
AACACCGCCG ACAGCCACGG CTGGATGGCG GGCCAGGATC TGCCGCTGGG CAGCAACGGA
TTGATGGGCG TGGCCTTCGG CGAGACCCGC AGCAACGGTG GCAGCAGCTT CGGTGGTGAT
CGTGGCCGCG ACCGGCAGGC ACAGGCGCAG CTGTATGCCG GCTGGAACCT TGGGCGTGGT
TATGCACTGG CCCAGTTCGG CAGCGGTCAG TTCACCCGCG CGCTGGACCG CCAGCTGCTG
CTGGGCGCTG GCGCGTATGG CGTGTCTGCA CGCTACGGTG GCCGTTTCAG CAGTGCCAGC
GTCGAAGGCG GTTATCGCTT CGGTCGCGCA GGGGCATCGT TGACGCCGTA TCTGGGGGCC
AGCAGCACCC GCGTCGATAC CGATGCGTTC AACGAATTGG GCGGGTTCGG CTTCGGCCTG
CGCGGTGATG CCAACCGTGT GCAACGCAGT CAGGTGCTGG CCGGCCTGCG TGGTGAACGT
GGGTGGGGAC GCTGGACCGT GCGTGGTCAT GCCGAATGGC AACAGCGCTT GGATGCACGC
GACGCGGACT GGCAGGCCAG TTTCGTCGGC GTCGATGCCT GGGCGCCGCT GGCCGGCTGG
GATGCGCCAC GCGGCAGTGC GCTGTTCGGT GTGGCGCTGG AATCGTGGTG GGGCCGCAAT
GGCCGTCTGA GCCTGGGCTT CGACCAGCGC ATCGGTGGCG AAGGCGCGCG GCAGGCAGCA
TTGCGCTACA GCACCGGCTT CTGA
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| Protein sequence | MERTTMVRSV LATALAMALT ACGGGGGGSN VRVDPPPTTP TPPTPPPPTT PPPAKPQEPT
FDAHLAVTNA RAAQAAGLTG QGVRIGIVDS GVQRTAVALN GRVLANFNYI DPARNNLGVD
DVVGHGTAVA SLAAGAAVGS WPGGIAPGAQ IVSARIISDK PPTDDGSGQG NAFSGPLGVA
QVHQDLISYN VKVMNNSWGG LYWTDLPTTA QVAAEYRPFV INHGGLVVFA AGNDGRSEPS
SLAALPSQKG VAGSLPAADL ERGWLVATAV DPYTPSALAS YANACGQAAR YCLAAPGSAV
YPDANGGSYY WNYGTSFAAP LISGAAALVW QRYPYFDNNL VRQTLLGTAK DIGAPGVDAV
FGYGLLDIGR AIKGPGRFDW GDVVANVDVA STGSLWSNDI VGSGGLVKQG GGTLVLAGNN
SYTGATRIER GILSLQNGGV IRSNVTILGQ SDPDSTGLQF NGGTPRVIGN VINGSSVFLT
TGNTTGTIEG DYTQQAGAQL MIALGAKALQ VTGNAKIDGG VRVHGVVTGY VPQNGARQDL
IHAVGSLSGT FSTPATSSGL DGVSLLQSSY GYDSNNAWLN LTQVSVSAAA TGLGVSAQAA
AQRLEGAFAA LDRNAGLQGS AFGTAAGALQ RTGGGSEGLA ASLQSLSGQA HARAESATFD
SIDMSRRAIA ERFDRVQAAP RLRGTWQSAL GEAGQGSFAG NTADSHGWMA GQDLPLGSNG
LMGVAFGETR SNGGSSFGGD RGRDRQAQAQ LYAGWNLGRG YALAQFGSGQ FTRALDRQLL
LGAGAYGVSA RYGGRFSSAS VEGGYRFGRA GASLTPYLGA SSTRVDTDAF NELGGFGFGL
RGDANRVQRS QVLAGLRGER GWGRWTVRGH AEWQQRLDAR DADWQASFVG VDAWAPLAGW
DAPRGSALFG VALESWWGRN GRLSLGFDQR IGGEGARQAA LRYSTGF
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