| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2200 |
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| Symbol | |
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| ID | 6476531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 2465005 |
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| End bp | 2466630 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642731382 |
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| Product | Polypeptide-transport-associated domain protein ShlB-type |
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| Protein accession | YP_002028587 |
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| Protein GI | 194365977 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.13693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCGA TGACTCCTGT TCCGTACCGA GCCGTCCGCC TTCCGCTGCG CCTGCATCCG
CTGGTGCTGG CCCTGGCAAC CCTGCCGCTG CCGCTGTTTG CGCAGGAGGC GGCGCCTGCG
CCCAGCGTGA ACATCAATGA GTACATCGTG CGTGGCAACA CCGTGCTCGA TTCGCGCCAG
ATTGAACGCG CGGTGGAGCC GTTCCTCGGC CCGGGCAAGA CCCTGGCCGA TGTCGAAAAG
GCACGCGACG CGGTGAATGC GCTGTATCAG CAGGCGGGCT ACCAGTCGGT CTATGTCGAG
CTGCCCGAAC AACAGGTCAG TGCTGGCGTG GTACTGCTGA AAGTGCAGCA GACGCCGATC
GGCCAGCTGC GGGTCGTAGG CACGAAGAAC GAATCGCCCG AACGCATCCG TGAGCGCGTG
CCGGCACTGG CCGAGGGCAA GGTGCCTGAT TTCGACCAGG CACAGAAGGA ATTGACCGCG
CTCAACGAAG GTGGCCGTCG CCAGGTGATG CCACTGGTGC GCGAAGGCCA GGTGCCGGGC
ACGATGGATG TGGACCTGCA GGTCGAGGAG AAGTCGCCGT GGCGGGCCAG CGTGGCGCTC
AACAACGACC ACAGCGCCGA CACCGAGAAG CTGCGCCTGA GTGCATCACT GGCCTACGAC
AATCTGTGGC AGCGCGGGCA CAGCGCCAAC ATCGGCGTGT ATCTGGCCCC GGAAGATACC
AAGCAGGCCA AGGTGTTTTC GGCCTCGTAC ATGATGCCGT TCGAAGGCAC GCCGTGGAGC
CTGGAAGCGT CCGGCTACAA GTCCGACAGC CGCGTACTGA ACGCAGGCGG ACAGGTCGGT
ACCGGCACCG GTACCAACGT GATCGGCAAC GGCCATTCGA TCGGCGTCAA GCTCAACTAT
CGACTGGCCG GCAGCAGCCA GTGGTGGCGC CAGCTCAGCC TCGGTGTGGA CTTCAAGGAC
ACCGAGGAAG ACACGCAGAT GGGCAAGGAG AGCCTGAAAA CGCCGCTGAA GTACGCGCCG
ATCACCCTGG CATTCGTCGG AGTGCGTCAG GGTGAGCAGG ACCAGCTGAG CATCAATACC
CAGCTGGTCG CCGGCACCCG TCGCCTGTTC GGCTATGGCA GCGATGCCAT CGGCTTCGGG
CAGAAGCGCT ACTGGGCCGA TCCAAGTTTC GTGGCCTTCA AGGCCGATGT GGCCAACACC
CACACCTTCG GCAGCGATTG GCAGTGGTAC GCGCGCGGCT CGCTGCAGGT AACCGATGCG
CCGCTGGTGT CGGCCGAGCA GTTCGCCGCC GGTGGCATGT ACACCGTGCG CGGCTATCTC
TCGGCCGAGG CGATCGGCGA CTACGGCGGC CTGGCCAGCC TGGAGTGGCG TACCCCAGCA
TGGTCGCTGT GGAGCGGCAC CGATCTGCGC GTCTACAGCT TTGCCGACGC CGCCTACCTG
CGCCTGCGCC AGCCGCTGCC CGAGCAGCGT GACAAGTACA ACCTGGCGTC GGTCGGCCTG
GGTGCGCAGC TGCGCCTGGG CGAACACCTG CAACTGCGCC TTGACTACGC CTGGCCCTAT
GCCGATGGCC CGGTCACGCG CAAGGACGAC CCGCGCCTGC ATTTCAACAT CAGCACCAGT
TACTGA
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| Protein sequence | MLSMTPVPYR AVRLPLRLHP LVLALATLPL PLFAQEAAPA PSVNINEYIV RGNTVLDSRQ
IERAVEPFLG PGKTLADVEK ARDAVNALYQ QAGYQSVYVE LPEQQVSAGV VLLKVQQTPI
GQLRVVGTKN ESPERIRERV PALAEGKVPD FDQAQKELTA LNEGGRRQVM PLVREGQVPG
TMDVDLQVEE KSPWRASVAL NNDHSADTEK LRLSASLAYD NLWQRGHSAN IGVYLAPEDT
KQAKVFSASY MMPFEGTPWS LEASGYKSDS RVLNAGGQVG TGTGTNVIGN GHSIGVKLNY
RLAGSSQWWR QLSLGVDFKD TEEDTQMGKE SLKTPLKYAP ITLAFVGVRQ GEQDQLSINT
QLVAGTRRLF GYGSDAIGFG QKRYWADPSF VAFKADVANT HTFGSDWQWY ARGSLQVTDA
PLVSAEQFAA GGMYTVRGYL SAEAIGDYGG LASLEWRTPA WSLWSGTDLR VYSFADAAYL
RLRQPLPEQR DKYNLASVGL GAQLRLGEHL QLRLDYAWPY ADGPVTRKDD PRLHFNISTS
Y
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