| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2091 |
|---|
| Symbol | |
|---|
| ID | 6476351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 2348206 |
|---|
| End bp | 2348910 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642731273 |
|---|
| Product | peptidase C39 bacteriocin processing |
|---|
| Protein accession | YP_002028478 |
|---|
| Protein GI | 194365868 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3271] Predicted double-glycine peptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0732241 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTT GCCGCCTCTC GATGCACCTG CTCGCGATGC TGTTGCTGCT GGGTACCACT
TCCGCGTCGG CGGGCGAGGT GCGCTTCAGC AGCGTACTGC CCAATGGCGC GTTGCTGCAG
CAGAAGGTGG AGAGCATGCA GGAGCGGCGC TACCGCAACG TGGTGCGCCA GCACACCGAT
TACAGCTGTG GGGCGGCTGC GCTGGCCACC ATCCTGCGCC ACGCCTACCA CCTCGATACC
GACGAGGCGA CGGTGATCGA GGGGATGATG GGGGTCTCCG ATCCCGCACT GGTGGCCGAG
CGCGGCTTTT CGCTGCTCGA CATCAAGCGC TACGTGGAAT CGCTGGGCAT GCGCGGCCGC
GGCTACCGTA TCGACGAATC CCGTCTGCGC ACCCTGCGCG TCCCCGGCCT GGTGCTGATG
GACGTGCGCG GCTTCCGCCA TTTCGTGGTG CTCAAGCAGG TGCGCAACGG CATCGTGGAA
GTGGCCGACC CGATCCTGGG CAACCGCAGC CTGGCGCTGC CTGAATTCCT TGCGGCCTGG
CCATCACGCG CGGTGTTCGT GGTGATCGGC AGCGATTTCG ATCGCAACAC CGCCCTGCTG
CAACCCAGCG AACGGCCCAG TGCGCGCGCG CTCTATGCGC GGCAGGGGCC GATCACCGAT
GCCGAACTGG TCGACTTCGG TTTCAGCCAC GCCGACCTGT TCTGA
|
|---|
| Protein sequence | MIRCRLSMHL LAMLLLLGTT SASAGEVRFS SVLPNGALLQ QKVESMQERR YRNVVRQHTD
YSCGAAALAT ILRHAYHLDT DEATVIEGMM GVSDPALVAE RGFSLLDIKR YVESLGMRGR
GYRIDESRLR TLRVPGLVLM DVRGFRHFVV LKQVRNGIVE VADPILGNRS LALPEFLAAW
PSRAVFVVIG SDFDRNTALL QPSERPSARA LYARQGPITD AELVDFGFSH ADLF
|
|---|
| |