Gene Smal_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1790 
Symbol 
ID6475743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2010433 
End bp2012229 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content69% 
IMG OID642730972 
Producthypothetical protein 
Protein accessionYP_002028177 
Protein GI194365567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.304981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.460878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCTG CACGGAACGC AGCCACGCAT GGCGTGGCTC TACTGCTGAT CGCTCACGTC 
GCGCACGCCG CTGACCGCCT GCAGCTGGAC CCCGCCGGCC TCGACCCGGC GCAGCAGCAG
CTCGCCAGCC AGACCCTGGC CGATGTGCAG TCGCTGTTGC CGGAAGGCCT GCTGCACGCC
TTGCCTGCGC AGGTGCGGGT GGCCTGGCGC GATGACCTGC CGGCCGACGT GCACGGCCGA
ACCTTCGACG GACGCATCGC GCTGCGTCGC GGGTTGCTGG ATGAAGGCAT GCCCGGCGCC
CGCCGTGCGC GCCGCAGCGC GCTGGTGCAC GAACTCACCC ACGTCGCCGA CCGTGGCGGT
GCGGACTGGT CGCGCACTGC GCGTTGGCGG GACCTGGCGG GGTGGCAGCG CAAGCCGTGG
CACCTCGGCC GTGGCGACAA CGACTTCCGT GACCGTAGTC CGGATGCCTA TGAACTGAAA
AGTCCGGCCG AGTATCTGGC GGTGAACGCC GAGCATTTCG TGCTCGACAG TGAATTCGCC
TGCCGGCGAC CGGCACTGGC GCAGTGGTAC CAGGCGCATT TTGGAACGCC GCCTTCGTTG
CCGCAGCCGC ATTGCGCTAC GACACTGCCG TTGCTGCAGG CCGAACCGGA AGAGGGCGCG
GCGTCGTTGC TGCAACTCGA CCCGGCACGC GTCTACGCGG TGGACTACCT GTTTGCCGAA
GGCAGCGCGC AGCCGATGAG CCGCTGGGGT CACAGCATGC TGCGGCTGGT GATCTGCCGG
CCGGGCCGGG AGCCGGGGCC GGATTGCCGG TTGGACCTGG AGTACCACCG GGTACTGTCG
TTCCGTGCGT TCGTCGGTGA CGTGCAGATT TCCAACTGGC GTGGGCTGAC CGGCGGTTAT
CCCTCGCGGC TGTTCGTGCT GCCGCTGCAG CAGGTGGTGG ACGAATACAC CAAGGTTGAG
CTGCGTGGGT TGCAATCGCT GCCATTGCAG TTGGAGCGCA GCGAGATCGC CAGCCTGCTC
GAGCGCACCG CACAGGTGCA CTGGAGCTAC GACGGACGCT ACTACTTCGT CAGCAACAAC
TGCGCAGTGG AAACCGCAAA GCTGCTGCAG GCCGGCGTGC CGAGGCTGGG CGAGGCCGGG
CTGGCCCAGC TCAGCCCGCG TGGCCTGAAG CGCCGGCTGG CACGGCTGCA GATGCTCGAC
GAACAGGTGC TGGTCGATCG CGGCGCGGCG CAGGCGCAGG GCTATTACTT CGCCTCGGCG
CGTGATCACT ACCAGCAGTT GTTCGGCGTG GCGGCAGCCC AGCTGGCATT GCCCGCACGC
GATGTACGCG GCTGGTTGAA GCTGCCTGCA CAGCAACGGG CACCGTGGTT GCTGAAGGGC
GACCTGCGCG CCAGCGCCGG CCTGCTGCTG CTGGAACAGG CCGCACAGCG GCGTGCCGAG
CTGCGCGCAC GTGACGTGCT CAAGCGCCGG TTGCTGGCCG CGCCCGAGAG CGCAGAAACC
CGCAGCCTGC GTGGGCTGCT TGAGCAGAGC GGGCAATGGC TGCGCCCGGG CACCCTGCTG
CGGGACGCCG GCTACGGGCT GCCGTTGGCC GACGAACAGG CGGTGCTGAC CGAGGCCGTG
TCCACCGCCA GCGCACAGGC AGTACCGGCG TGGCAGGCGC TGCGCGTGCA GCTGCGTCAG
CGGCTGCCGG TGAAGCAACG CGATGAGATG GATGCGATCG ATGCCAATCT GGCCGCACTG
GGTTCACACC TGCGCACGCA GGCAGCCAGT CCGGCTATTG ACGCGGCAGT TCGATGA
 
Protein sequence
MTSARNAATH GVALLLIAHV AHAADRLQLD PAGLDPAQQQ LASQTLADVQ SLLPEGLLHA 
LPAQVRVAWR DDLPADVHGR TFDGRIALRR GLLDEGMPGA RRARRSALVH ELTHVADRGG
ADWSRTARWR DLAGWQRKPW HLGRGDNDFR DRSPDAYELK SPAEYLAVNA EHFVLDSEFA
CRRPALAQWY QAHFGTPPSL PQPHCATTLP LLQAEPEEGA ASLLQLDPAR VYAVDYLFAE
GSAQPMSRWG HSMLRLVICR PGREPGPDCR LDLEYHRVLS FRAFVGDVQI SNWRGLTGGY
PSRLFVLPLQ QVVDEYTKVE LRGLQSLPLQ LERSEIASLL ERTAQVHWSY DGRYYFVSNN
CAVETAKLLQ AGVPRLGEAG LAQLSPRGLK RRLARLQMLD EQVLVDRGAA QAQGYYFASA
RDHYQQLFGV AAAQLALPAR DVRGWLKLPA QQRAPWLLKG DLRASAGLLL LEQAAQRRAE
LRARDVLKRR LLAAPESAET RSLRGLLEQS GQWLRPGTLL RDAGYGLPLA DEQAVLTEAV
STASAQAVPA WQALRVQLRQ RLPVKQRDEM DAIDANLAAL GSHLRTQAAS PAIDAAVR